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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2078250 |
| Transcript ID | Lj5g3v2078250.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: nucleobase-ascorbate transporter 4-like [Glycine max] gi|356574323|ref|XP_003555298.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 480 | 480 | 0 | ||
| PANTHER | 1 | 480 | 480 | 0 | ||
| Phobius | 1 | 23 | 23 | – | – | |
| Phobius | 1 | 3 | 3 | – | – | |
| Phobius | 4 | 15 | 12 | – | – | |
| TMHMM | 5 | 22 | 18 | – | – | |
| Pfam | 6 | 391 | 386 | 1.40E-61 | ||
| Phobius | 16 | 23 | 8 | – | – | |
| Phobius | 24 | 46 | 23 | – | – | |
| TMHMM | 43 | 65 | 23 | – | – | |
| Phobius | 47 | 67 | 21 | – | – | |
| Phobius | 68 | 86 | 19 | – | – | |
| TMHMM | 85 | 107 | 23 | – | – | |
| Phobius | 87 | 108 | 22 | – | – | |
| Phobius | 109 | 113 | 5 | – | – | |
| TMHMM | 114 | 136 | 23 | – | – | |
| Phobius | 114 | 135 | 22 | – | – | |
| Phobius | 136 | 141 | 6 | – | – | |
| Phobius | 142 | 160 | 19 | – | – | |
| Phobius | 161 | 171 | 11 | – | – | |
| Phobius | 172 | 194 | 23 | – | – | |
| TMHMM | 172 | 194 | 23 | – | – | |
| Phobius | 195 | 314 | 120 | – | – | |
| Phobius | 315 | 337 | 23 | – | – | |
| TMHMM | 315 | 337 | 23 | – | – | |
| Phobius | 338 | 342 | 5 | – | – | |
| TMHMM | 341 | 363 | 23 | – | – | |
| Phobius | 343 | 363 | 21 | – | – | |
| Phobius | 364 | 374 | 11 | – | – | |
| TMHMM | 370 | 392 | 23 | – | – | |
| Phobius | 375 | 392 | 18 | – | – | |
| Phobius | 393 | 411 | 19 | – | – | |
| Phobius | 412 | 432 | 21 | – | – | |
| TMHMM | 412 | 434 | 23 | – | – | |
| Phobius | 433 | 481 | 49 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj5g3v2078250.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2078250.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.