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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2112020 |
| Transcript ID | Lj5g3v2112020.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Transducin family protein / WD-40 repeat family protein [Theobroma cacao] gi|508706512|gb|EOX98408.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 127 | 213 | 87 | 4.08E-07 | ||
| Gene3D | 128 | 218 | 91 | 7.70E-09 | ||
| Gene3D | 351 | 379 | 29 | 7.70E-09 | ||
| SMART | 352 | 370 | 19 | 0.0028 | ||
| PANTHER | 447 | 804 | 358 | 9.10E-238 | – | |
| PANTHER | 447 | 804 | 358 | 9.10E-238 | – | |
| SUPERFAMILY | 467 | 736 | 270 | 1.37E-32 | ||
| Gene3D | 469 | 736 | 268 | 6.40E-30 | ||
| SMART | 499 | 541 | 43 | 1.6 | ||
| ProSiteProfiles | 508 | 688 | 181 | 13.237 | ||
| SMART | 545 | 592 | 48 | 38 | ||
| SMART | 595 | 636 | 42 | 5.50E-05 | ||
| ProSiteProfiles | 603 | 638 | 36 | 10.141 | ||
| SMART | 641 | 679 | 39 | 65 | ||
| MobiDBLite | 787 | 806 | 20 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj5g3v2112020.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2112020.1, powered by CORGI.
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