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IPR003603

Source: InterPro

Description

IPR003603 is a U2A'/phosphoprotein 32 family A, C-terminal.

<p>This motif occurs C-terminal to leucine-rich repeats in "sds22-like" and "typical" LRR-containing proteins. Examples from the metazoa are described as either "Acidic leucine-rich nuclear phosphoprotein 32 family member A" or have been characterised as U2A', the protein that interacts with U2B'' facilitating the interaction with U2 snRNA. U2A' is required for the spliceosome assembly and the efficient addition of U2 snRNP onto the pre-mRNA [[cite:PUB00033211]]. The crystal structure of the spliceosomal U2B"-U2A' protein complex bound to a fragment of U2 small nuclear RNA has been described [[cite:PUB00009402]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 4

Transcript Name Description Predicted domains Domain count
Lj0g3v0288609.1
– PREDICTED: U2 small nuclear ribonucleoprotein A'-like isoform X1 [Cicer arietinum] gi|502090322|ref|XP_004489191.1|
Domains
10
Lj5g3v2112020.1
– Transducin family protein / WD-40 repeat family protein [Theobroma cacao] gi|508706512|gb|EOX98408.1|
Domains
16
LotjaGi5g1v0325100.1
– WD40 repeat-containing protein; TAIR: AT4G34280.1 transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q92466|DDB2_HUMAN DNA damage-binding protein 2; TrEMBL-Plants: tr|V7BB13|V7BB13_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0325100
Domains
17
LotjaGi5g1v0366500.1
– U2 small nuclear ribonucleoprotein A; TAIR: AT1G09760.1 U2 small nuclear ribonucleoprotein A; Swiss-Prot: sp|P43333|RU2A_ARATH U2 small nuclear ribonucleoprotein A'; TrEMBL-Plants: tr|I3SUJ1|I3SUJ1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0366500
Domains
11

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 25.00