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Lj5g3v2112180.1

Overview

Field Value
Gene ID Lj5g3v2112180
Transcript ID Lj5g3v2112180.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: transcription factor bHLH113-like isoform X1 [Cicer arietinum] gi|502120333|ref|XP_004496925.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR16223
52 268 217 1.30E-79 –
PANTHER
PTHR16223:SF17
52 268 217 1.30E-79 –
MobiDBLite
mobidb-lite
124 168 45 – –
ProSiteProfiles
PS50888
154 203 50 11.915
IPR011598
SMART
SM00353
160 209 50 3.60E-04
IPR011598
CDD
cd00083
163 208 46 1.39E-06 –
SUPERFAMILY
SSF47459
163 216 54 3.27E-12
IPR011598
Gene3D
G3DSA:4.10.280.10
164 210 47 2.00E-08
IPR011598

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0046983
Molecular function Protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
Subterm of

Genome browser

LORE1 insertions 2

Expression data

Expression pattern

Expression pattern of Lj5g3v2112180.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v2112180.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.