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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2152700 |
| Transcript ID | Lj5g3v2152700.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Replication factor A protein [Medicago truncatula] gi|357516559|ref|XP_003628568.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 229 | 229 | – | – | |
| Gene3D | 24 | 120 | 97 | 1.50E-10 | – | |
| PANTHER | 24 | 125 | 102 | 4.50E-21 | – | |
| SUPERFAMILY | 25 | 122 | 98 | 7.10E-14 | ||
| CDD | 32 | 120 | 89 | 3.96E-23 | – | |
| Pfam | 57 | 121 | 65 | 4.80E-12 | ||
| CDD | 119 | 202 | 84 | 4.04E-12 | – | |
| SUPERFAMILY | 120 | 209 | 90 | 1.97E-05 | ||
| Gene3D | 137 | 201 | 65 | 1.40E-04 | – | |
| Pfam | 141 | 206 | 66 | 3.50E-07 | ||
| Phobius | 230 | 248 | 19 | – | – | |
| TMHMM | 230 | 252 | 23 | – | – | |
| Phobius | 249 | 267 | 19 | – | – | |
| TMHMM | 267 | 289 | 23 | – | – | |
| Phobius | 268 | 293 | 26 | – | – | |
| Phobius | 294 | 294 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj5g3v2152700.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2152700.3, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.