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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2169430 |
| Transcript ID | Lj5g3v2169430.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Protein TRANSPARENT TESTA [Medicago truncatula] gi|357444617|ref|XP_003592586.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 45 | 45 | – | – | |
| PANTHER | 9 | 474 | 466 | 0 | – | |
| PANTHER | 9 | 474 | 466 | 0 | – | |
| CDD | 37 | 473 | 437 | 1.79E-173 | – | |
| TMHMM | 45 | 67 | 23 | – | – | |
| Phobius | 46 | 70 | 25 | – | – | |
| Pfam | 47 | 207 | 161 | 7.40E-39 | ||
| TIGRFAM | 47 | 444 | 398 | 2.40E-89 | ||
| Phobius | 71 | 81 | 11 | – | – | |
| Phobius | 82 | 102 | 21 | – | – | |
| TMHMM | 82 | 104 | 23 | – | – | |
| Phobius | 103 | 121 | 19 | – | – | |
| Phobius | 122 | 140 | 19 | – | – | |
| TMHMM | 125 | 147 | 23 | – | – | |
| Phobius | 141 | 159 | 19 | – | – | |
| Phobius | 160 | 181 | 22 | – | – | |
| TMHMM | 162 | 181 | 20 | – | – | |
| Phobius | 182 | 187 | 6 | – | – | |
| TMHMM | 188 | 210 | 23 | – | – | |
| Phobius | 188 | 212 | 25 | – | – | |
| Phobius | 213 | 217 | 5 | – | – | |
| Phobius | 218 | 238 | 21 | – | – | |
| TMHMM | 220 | 242 | 23 | – | – | |
| Phobius | 239 | 258 | 20 | – | – | |
| Phobius | 259 | 280 | 22 | – | – | |
| TMHMM | 259 | 278 | 20 | – | – | |
| Pfam | 269 | 430 | 162 | 1.40E-24 | ||
| Phobius | 281 | 299 | 19 | – | – | |
| Phobius | 300 | 321 | 22 | – | – | |
| Phobius | 322 | 340 | 19 | – | – | |
| TMHMM | 340 | 362 | 23 | – | – | |
| Phobius | 341 | 366 | 26 | – | – | |
| Phobius | 367 | 385 | 19 | – | – | |
| Phobius | 386 | 407 | 22 | – | – | |
| Phobius | 408 | 418 | 11 | – | – | |
| TMHMM | 414 | 436 | 23 | – | – | |
| Phobius | 419 | 438 | 20 | – | – | |
| Phobius | 439 | 443 | 5 | – | – | |
| TMHMM | 441 | 463 | 23 | – | – | |
| Phobius | 444 | 464 | 21 | – | – | |
| Phobius | 465 | 491 | 27 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj5g3v2169430.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2169430.1, powered by CORGI.
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