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Lj5g3v2216120.2

Overview

Field Value
Gene ID Lj5g3v2216120
Transcript ID Lj5g3v2216120.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: serine/threonine-protein kinase PRP4 homolog [Cicer arietinum] gi|502121352|ref|XP_004497282.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 553 553 – –
Coils
Coil
513 540 28 – –
MobiDBLite
mobidb-lite
584 606 23 – –
PANTHER
PTHR24056
598 917 320 4.10E-177 –
PANTHER
PTHR24056:SF45
598 917 320 4.10E-177 –
Gene3D
G3DSA:3.30.200.20
644 740 97 2.40E-21 –
SUPERFAMILY
SSF56112
647 977 331 5.93E-73
IPR011009
CDD
cd14135
659 975 317 0 –
SMART
SM00220
660 975 316 4.10E-72
IPR000719
ProSiteProfiles
PS50011
660 975 316 37.63
IPR000719
Pfam
PF00069
663 975 313 2.00E-48
IPR000719
Gene3D
G3DSA:1.10.510.10
741 976 236 3.20E-58 –
ProSitePatterns
PS00108
787 799 13 –
IPR008271
PANTHER
PTHR24056:SF45
938 978 41 4.10E-177 –
PANTHER
PTHR24056
938 978 41 4.10E-177 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 3

Expression data

Expression pattern

Expression pattern of Lj5g3v2216120.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v2216120.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.