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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2234520 |
| Transcript ID | Lj5g3v2234520.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: CASP-like protein At2g38480-like [Glycine max] gi|356566744|ref|XP_003551589.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 29 | 29 | – | – | |
| Phobius | 1 | 43 | 43 | – | – | |
| PANTHER | 33 | 125 | 93 | 3.00E-54 | – | |
| PANTHER | 33 | 125 | 93 | 3.00E-54 | – | |
| Pfam | 39 | 126 | 88 | 3.60E-17 | ||
| TMHMM | 44 | 63 | 20 | – | – | |
| Phobius | 44 | 63 | 20 | – | – | |
| Phobius | 64 | 77 | 14 | – | – | |
| Phobius | 78 | 97 | 20 | – | – | |
| TMHMM | 78 | 97 | 20 | – | – | |
| Phobius | 98 | 124 | 27 | – | – | |
| Phobius | 125 | 145 | 21 | – | – | |
| TMHMM | 126 | 145 | 20 | – | – | |
| Phobius | 146 | 150 | 5 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj5g3v2234520.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2234520.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.