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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2258520 |
| Transcript ID | Lj5g3v2258520.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: sugar transport protein 10-like [Glycine max] gi|356575430|ref|XP_003555844.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 18 | 18 | – | – | |
| PANTHER | 8 | 512 | 505 | 0 | – | |
| PANTHER | 8 | 512 | 505 | 0 | – | |
| TIGRFAM | 18 | 483 | 466 | 7.30E-118 | ||
| Phobius | 19 | 39 | 21 | – | – | |
| SUPERFAMILY | 21 | 483 | 463 | 4.05E-58 | ||
| TMHMM | 21 | 43 | 23 | – | – | |
| ProSiteProfiles | 26 | 476 | 451 | 43.535 | ||
| Pfam | 27 | 487 | 461 | 1.40E-129 | ||
| PRINTS | 34 | 44 | 11 | 1.80E-28 | ||
| Phobius | 40 | 81 | 42 | – | – | |
| Gene3D | 45 | 227 | 183 | 1.20E-23 | – | |
| CDD | 78 | 473 | 396 | 6.17E-23 | ||
| Phobius | 82 | 101 | 20 | – | – | |
| TMHMM | 83 | 102 | 20 | – | – | |
| Phobius | 102 | 112 | 11 | – | – | |
| Phobius | 113 | 132 | 20 | – | – | |
| TMHMM | 115 | 134 | 20 | – | – | |
| Phobius | 133 | 137 | 5 | – | – | |
| TMHMM | 138 | 160 | 23 | – | – | |
| PRINTS | 138 | 157 | 20 | 1.80E-28 | ||
| Phobius | 138 | 159 | 22 | – | – | |
| ProSitePatterns | 143 | 168 | 26 | – | ||
| Phobius | 160 | 170 | 11 | – | – | |
| TMHMM | 167 | 189 | 23 | – | – | |
| Phobius | 171 | 193 | 23 | – | – | |
| Phobius | 194 | 198 | 5 | – | – | |
| Phobius | 199 | 221 | 23 | – | – | |
| TMHMM | 199 | 221 | 23 | – | – | |
| Phobius | 222 | 283 | 62 | – | – | |
| Gene3D | 283 | 478 | 196 | 6.80E-13 | – | |
| TMHMM | 284 | 306 | 23 | – | – | |
| Phobius | 284 | 307 | 24 | – | – | |
| PRINTS | 293 | 303 | 11 | 1.80E-28 | ||
| Phobius | 308 | 318 | 11 | – | – | |
| Phobius | 319 | 341 | 23 | – | – | |
| TMHMM | 319 | 341 | 23 | – | – | |
| ProSitePatterns | 337 | 354 | 18 | – | ||
| Phobius | 342 | 347 | 6 | – | – | |
| Phobius | 348 | 373 | 26 | – | – | |
| TMHMM | 348 | 370 | 23 | – | – | |
| Phobius | 374 | 384 | 11 | – | – | |
| Phobius | 385 | 404 | 20 | – | – | |
| PRINTS | 389 | 410 | 22 | 1.80E-28 | ||
| TMHMM | 390 | 412 | 23 | – | – | |
| Phobius | 405 | 424 | 20 | – | – | |
| PRINTS | 412 | 424 | 13 | 1.80E-28 | ||
| Phobius | 425 | 445 | 21 | – | – | |
| TMHMM | 425 | 447 | 23 | – | – | |
| Phobius | 446 | 450 | 5 | – | – | |
| TMHMM | 451 | 473 | 23 | – | – | |
| Phobius | 451 | 472 | 22 | – | – | |
| Phobius | 473 | 512 | 40 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj5g3v2258520.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2258520.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.