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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2263920 |
| Transcript ID | Lj5g3v2263920.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protease 2-like [Glycine max] gi|356575387|ref|XP_003555823.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 31 | 31 | – | – | |
| Phobius | 1 | 14 | 14 | – | – | |
| SignalP | 1 | 42 | 42 | – | – | |
| Phobius | 15 | 26 | 12 | – | – | |
| Phobius | 27 | 31 | 5 | – | – | |
| Phobius | 32 | 780 | 749 | – | – | |
| MobiDBLite | 41 | 78 | 38 | – | – | |
| PANTHER | 44 | 780 | 737 | 0 | ||
| PANTHER | 44 | 780 | 737 | 0 | – | |
| SUPERFAMILY | 75 | 507 | 433 | 2.38E-76 | – | |
| Pfam | 78 | 497 | 420 | 5.40E-108 | ||
| Gene3D | 216 | 344 | 129 | 2.00E-05 | ||
| Gene3D | 454 | 774 | 321 | 5.20E-115 | ||
| SUPERFAMILY | 511 | 753 | 243 | 3.62E-41 | ||
| PRINTS | 544 | 562 | 19 | 1.90E-54 | ||
| Pfam | 561 | 776 | 216 | 9.80E-66 | ||
| PRINTS | 570 | 594 | 25 | 1.90E-54 | ||
| PRINTS | 598 | 617 | 20 | 1.90E-54 | ||
| PRINTS | 628 | 648 | 21 | 1.90E-54 | ||
| PRINTS | 686 | 701 | 16 | 1.90E-54 | ||
| PRINTS | 704 | 726 | 23 | 1.90E-54 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Molecular function | Serine-type peptidase activity | Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Molecular function | Serine-type exopeptidase activity | Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). |
Expression pattern of Lj5g3v2263920.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2263920.1, powered by CORGI.
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