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| Field | Value |
|---|---|
| Gene ID | Lj6g3v0030010 |
| Transcript ID | Lj6g3v0030010.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | phosphate transporter [Sesbania rostrata] gi|12697486|emb|CAC28219.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | – | – | |
| PANTHER | 4 | 185 | 182 | 8.20E-207 | – | |
| PANTHER | 4 | 185 | 182 | 8.20E-207 | – | |
| SUPERFAMILY | 11 | 313 | 303 | 5.10E-39 | ||
| TMHMM | 21 | 43 | 23 | – | – | |
| Phobius | 21 | 48 | 28 | – | – | |
| ProSiteProfiles | 23 | 314 | 292 | 22.628 | ||
| CDD | 24 | 190 | 167 | 2.85E-17 | ||
| Pfam | 24 | 293 | 270 | 2.30E-31 | ||
| Phobius | 49 | 67 | 19 | – | – | |
| Gene3D | 66 | 247 | 182 | 1.40E-19 | – | |
| TMHMM | 68 | 90 | 23 | – | – | |
| Phobius | 68 | 87 | 20 | – | – | |
| Phobius | 88 | 98 | 11 | – | – | |
| TMHMM | 99 | 121 | 23 | – | – | |
| Phobius | 99 | 118 | 20 | – | – | |
| Phobius | 119 | 123 | 5 | – | – | |
| Phobius | 124 | 141 | 18 | – | – | |
| TMHMM | 131 | 150 | 20 | – | – | |
| Phobius | 142 | 161 | 20 | – | – | |
| Phobius | 162 | 189 | 28 | – | – | |
| TMHMM | 163 | 185 | 23 | – | – | |
| Phobius | 190 | 212 | 23 | – | – | |
| PANTHER | 208 | 314 | 107 | 8.20E-207 | – | |
| PANTHER | 208 | 314 | 107 | 8.20E-207 | – | |
| TMHMM | 213 | 232 | 20 | – | – | |
| Phobius | 213 | 232 | 20 | – | – | |
| Phobius | 233 | 314 | 82 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj6g3v0030010.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v0030010.1, powered by CORGI.
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