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| Field | Value |
|---|---|
| Gene ID | Lj6g3v0435060 |
| Transcript ID | Lj6g3v0435060.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: proline-rich receptor-like protein kinase PERK13-like [Glycine max] gi|356569560|ref|XP_003552967.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 29 | 29 | – | – | |
| MobiDBLite | 66 | 91 | 26 | – | – | |
| PANTHER | 106 | 141 | 36 | 3.00E-174 | – | |
| PANTHER | 106 | 141 | 36 | 3.00E-174 | – | |
| PANTHER | 164 | 381 | 218 | 3.00E-174 | – | |
| PANTHER | 164 | 381 | 218 | 3.00E-174 | – | |
| Gene3D | 165 | 262 | 98 | 2.40E-22 | – | |
| SUPERFAMILY | 187 | 380 | 194 | 4.86E-58 | ||
| SMART | 200 | 381 | 182 | 8.20E-11 | ||
| ProSiteProfiles | 200 | 381 | 182 | 30.732 | ||
| Pfam | 201 | 378 | 178 | 9.00E-35 | ||
| Gene3D | 263 | 380 | 118 | 3.80E-32 | – | |
| ProSitePatterns | 324 | 336 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj6g3v0435060.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v0435060.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.