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| Field | Value |
|---|---|
| Gene ID | Lj6g3v0647600 |
| Transcript ID | Lj6g3v0647600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: THO complex subunit 3-like isoform X2 [Cicer arietinum] gi|502129124|ref|XP_004500191.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 147 | 147 | 4.70E-226 | – | |
| SMART | 8 | 47 | 40 | 8.60E-07 | ||
| CDD | 11 | 313 | 303 | 2.03E-40 | – | |
| Gene3D | 12 | 159 | 148 | 1.90E-31 | ||
| Pfam | 12 | 46 | 35 | 5.20E-06 | ||
| ProSiteProfiles | 15 | 287 | 273 | 30.031 | ||
| ProSiteProfiles | 15 | 49 | 35 | 12.781 | ||
| SUPERFAMILY | 20 | 314 | 295 | 1.69E-55 | ||
| PRINTS | 34 | 48 | 15 | 2.60E-07 | ||
| SMART | 54 | 94 | 41 | 4.90E-08 | ||
| Pfam | 60 | 94 | 35 | 1.10E-04 | ||
| ProSiteProfiles | 61 | 103 | 43 | 14.92 | ||
| ProSitePatterns | 81 | 95 | 15 | – | ||
| PRINTS | 81 | 95 | 15 | 2.60E-07 | ||
| SMART | 156 | 194 | 39 | 100 | ||
| Gene3D | 161 | 313 | 153 | 1.30E-30 | ||
| PANTHER | 166 | 330 | 165 | 4.70E-226 | – | |
| SMART | 197 | 236 | 40 | 7.70E-09 | ||
| Pfam | 200 | 236 | 37 | 7.30E-04 | ||
| ProSiteProfiles | 204 | 245 | 42 | 12.915 | ||
| PRINTS | 223 | 237 | 15 | 2.60E-07 | ||
| SMART | 239 | 278 | 40 | 6.3 | ||
| Pfam | 250 | 300 | 51 | 2.10E-04 | ||
| SMART | 281 | 319 | 39 | 89 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj6g3v0647600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v0647600.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.