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| Field | Value |
|---|---|
| Gene ID | Lj6g3v0927490 |
| Transcript ID | Lj6g3v0927490.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: vacuolar protein sorting-associated protein 16 homolog [Cicer arietinum] gi|502128485|ref|XP_004499978.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 819 | 819 | 0 | – | |
| PANTHER | 1 | 819 | 819 | 0 | ||
| PIRSF | 1 | 819 | 819 | 3.20E-302 | ||
| Pfam | 8 | 416 | 409 | 2.40E-81 | ||
| Gene3D | 66 | 255 | 190 | 2.70E-05 | ||
| SUPERFAMILY | 82 | 256 | 175 | 9.15E-09 | ||
| Pfam | 513 | 818 | 306 | 7.00E-68 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. | ||
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. | ||
| Biological process | Vacuole organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a vacuole. |
Expression pattern of Lj6g3v0927490.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v0927490.2, powered by CORGI.
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