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IPR016534 is a Vacuolar protein sorting-associated protein 16.
<p>This group represents a vacuolar protein sorting-associated protein 16 (Vps16). Vps16 may play a role in vesicle-mediated protein trafficking to endosomal/lysosomal compartments and in membrane docking/fusion reactions [[cite:PUB00062953], [cite:PUB00062954], [cite:PUB00062955]].</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. | ||
| Biological process | Vacuole organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a vacuole. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: vacuolar protein sorting-associated protein 16 homolog [Glycine max] gi|356567439|ref|XP_003551927.1| | 5 | ||
| – | PREDICTED: vacuolar protein sorting-associated protein 16 homolog [Cicer arietinum] gi|502128485|ref|XP_004499978.1| | 12 | ||
| – | Vacuolar protein sorting-associated protein 16-like protein; TAIR: AT2G38020.1 vacuoleless1 (VCL1); Swiss-Prot: sp|Q93VQ0|VCL1_ARATH Protein VACUOLELESS1; TrEMBL-Plants: tr|G7IXE7|G7IXE7_MEDTR Vacuolar protein sorting-associated-like protein; Found in the gene: LotjaGi6g1v0174000 | 13 | ||
| – | Vacuolar protein sorting-associated protein 16-like protein; TAIR: AT2G38020.1 vacuoleless1 (VCL1); Swiss-Prot: sp|Q93VQ0|VCL1_ARATH Protein VACUOLELESS1; TrEMBL-Plants: tr|G7IXE7|G7IXE7_MEDTR Vacuolar protein sorting-associated-like protein; Found in the gene: LotjaGi6g1v0174000 | 13 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| SSF50978 | SUPERFAMILY | 1 | 25.00 |