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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1077860 |
| Transcript ID | Lj6g3v1077860.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: transmembrane 9 superfamily member 4-like [Glycine max] gi|356516998|ref|XP_003527177.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 644 | 644 | 0 | – | |
| PANTHER | 1 | 644 | 644 | 0 | ||
| Phobius | 1 | 11 | 11 | – | – | |
| Phobius | 12 | 34 | 23 | – | – | |
| TMHMM | 13 | 35 | 23 | – | – | |
| Phobius | 35 | 279 | 245 | – | – | |
| Pfam | 62 | 600 | 539 | 1.90E-220 | ||
| Phobius | 280 | 304 | 25 | – | – | |
| TMHMM | 282 | 304 | 23 | – | – | |
| Phobius | 305 | 345 | 41 | – | – | |
| TMHMM | 345 | 367 | 23 | – | – | |
| Phobius | 346 | 372 | 27 | – | – | |
| Phobius | 373 | 377 | 5 | – | – | |
| TMHMM | 377 | 399 | 23 | – | – | |
| Phobius | 378 | 398 | 21 | – | – | |
| Phobius | 399 | 418 | 20 | – | – | |
| Phobius | 419 | 439 | 21 | – | – | |
| TMHMM | 419 | 438 | 20 | – | – | |
| Phobius | 440 | 444 | 5 | – | – | |
| Phobius | 445 | 468 | 24 | – | – | |
| TMHMM | 448 | 470 | 23 | – | – | |
| Phobius | 469 | 496 | 28 | – | – | |
| Phobius | 497 | 528 | 32 | – | – | |
| TMHMM | 502 | 524 | 23 | – | – | |
| Phobius | 529 | 533 | 5 | – | – | |
| Phobius | 534 | 562 | 29 | – | – | |
| TMHMM | 534 | 556 | 23 | – | – | |
| Phobius | 563 | 573 | 11 | – | – | |
| TMHMM | 569 | 591 | 23 | – | – | |
| Phobius | 574 | 593 | 20 | – | – | |
| Phobius | 594 | 612 | 19 | – | – | |
| TMHMM | 611 | 633 | 23 | – | – | |
| Phobius | 613 | 638 | 26 | – | – | |
| Phobius | 639 | 644 | 6 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj6g3v1077860.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1077860.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.