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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1412730 |
| Transcript ID | Lj6g3v1412730.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | cellulose synthase [Betula luminifera] gi|212960417|gb|ACJ38666.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 420 | 420 | – | – | |
| PANTHER | 1 | 206 | 206 | 0 | – | |
| PANTHER | 1 | 206 | 206 | 0 | – | |
| Pfam | 1 | 636 | 636 | 0 | ||
| SUPERFAMILY | 61 | 127 | 67 | 2.44E-07 | ||
| SUPERFAMILY | 165 | 224 | 60 | 2.44E-07 | ||
| PANTHER | 266 | 628 | 363 | 0 | – | |
| PANTHER | 266 | 628 | 363 | 0 | – | |
| SUPERFAMILY | 322 | 447 | 126 | 2.44E-07 | ||
| TMHMM | 420 | 442 | 23 | – | – | |
| Phobius | 421 | 442 | 22 | – | – | |
| Phobius | 443 | 453 | 11 | – | – | |
| TMHMM | 454 | 476 | 23 | – | – | |
| Phobius | 454 | 472 | 19 | – | – | |
| Phobius | 473 | 491 | 19 | – | – | |
| TMHMM | 491 | 513 | 23 | – | – | |
| Phobius | 492 | 512 | 21 | – | – | |
| Phobius | 513 | 532 | 20 | – | – | |
| Phobius | 533 | 554 | 22 | – | – | |
| TMHMM | 533 | 555 | 23 | – | – | |
| Phobius | 555 | 573 | 19 | – | – | |
| TMHMM | 570 | 592 | 23 | – | – | |
| Phobius | 574 | 592 | 19 | – | – | |
| Phobius | 593 | 603 | 11 | – | – | |
| Phobius | 604 | 624 | 21 | – | – | |
| TMHMM | 605 | 624 | 20 | – | – | |
| Phobius | 625 | 643 | 19 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Cellulose synthase (UDP-forming) activity | Catalysis of the reaction: UDP-glucose + ((1,4)-beta-D-glucosyl)(n) = UDP + ((1,4)-beta-D-glucosyl)(n+1). | ||
| Biological process | Cellulose biosynthetic process | The chemical reactions and pathways resulting in the formation of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation. |
Expression pattern of Lj6g3v1412730.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1412730.1, powered by CORGI.
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