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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1574610 |
| Transcript ID | Lj6g3v1574610.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable boron transporter 2-like [Glycine max] gi|356529064|ref|XP_003533117.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 374 | 374 | 0 | ||
| PANTHER | 1 | 374 | 374 | 0 | – | |
| Phobius | 1 | 25 | 25 | – | – | |
| Pfam | 3 | 179 | 177 | 6.00E-36 | ||
| Gene3D | 18 | 59 | 42 | 4.20E-07 | – | |
| Phobius | 26 | 52 | 27 | – | – | |
| TMHMM | 27 | 49 | 23 | – | – | |
| Phobius | 53 | 63 | 11 | – | – | |
| TMHMM | 64 | 86 | 23 | – | – | |
| Phobius | 64 | 85 | 22 | – | – | |
| Phobius | 86 | 89 | 4 | – | – | |
| Phobius | 90 | 109 | 20 | – | – | |
| TMHMM | 91 | 110 | 20 | – | – | |
| Phobius | 110 | 120 | 11 | – | – | |
| TMHMM | 120 | 142 | 23 | – | – | |
| Phobius | 121 | 142 | 22 | – | – | |
| Phobius | 143 | 153 | 11 | – | – | |
| Phobius | 154 | 176 | 23 | – | – | |
| TMHMM | 154 | 176 | 23 | – | – | |
| Phobius | 177 | 195 | 19 | – | – | |
| TMHMM | 196 | 216 | 21 | – | – | |
| Phobius | 196 | 215 | 20 | – | – | |
| Pfam | 202 | 373 | 172 | 2.10E-25 | ||
| Phobius | 216 | 234 | 19 | – | – | |
| Phobius | 235 | 255 | 21 | – | – | |
| Phobius | 256 | 290 | 35 | – | – | |
| TMHMM | 287 | 309 | 23 | – | – | |
| Phobius | 291 | 310 | 20 | – | – | |
| Phobius | 311 | 330 | 20 | – | – | |
| Phobius | 331 | 351 | 21 | – | – | |
| TMHMM | 336 | 358 | 23 | – | – | |
| Phobius | 352 | 553 | 202 | – | – | |
| PANTHER | 449 | 703 | 255 | 0 | ||
| PANTHER | 449 | 703 | 255 | 0 | – | |
| Pfam | 460 | 550 | 91 | 2.80E-18 | ||
| Phobius | 554 | 580 | 27 | – | – | |
| TMHMM | 554 | 576 | 23 | – | – | |
| Phobius | 581 | 711 | 131 | – | – | |
| MobiDBLite | 655 | 711 | 57 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Inorganic anion exchanger activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: inorganic anion A(out) + inorganic anion B(in) = inorganic anion A(in) + inorganic anion B(out). | ||
| Biological process | Anion transport | The directed movement of anions, atoms or small molecules with a net negative charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj6g3v1574610.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1574610.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.