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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1753120 |
| Transcript ID | Lj6g3v1753120.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: inositol transporter 4-like [Glycine max] gi|356532347|ref|XP_003534735.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 200 | 200 | 8.57 | ||
| Phobius | 1 | 72 | 72 | – | – | |
| PANTHER | 1 | 136 | 136 | 3.40E-80 | – | |
| PANTHER | 1 | 136 | 136 | 3.40E-80 | – | |
| Pfam | 20 | 126 | 107 | 8.20E-24 | ||
| SUPERFAMILY | 24 | 126 | 103 | 2.09E-13 | ||
| TMHMM | 35 | 57 | 23 | – | – | |
| CDD | 39 | 126 | 88 | 7.67E-08 | ||
| Gene3D | 40 | 121 | 82 | 2.00E-10 | – | |
| TMHMM | 72 | 94 | 23 | – | – | |
| Phobius | 73 | 93 | 21 | – | – | |
| ProSitePatterns | 91 | 107 | 17 | – | ||
| Phobius | 94 | 104 | 11 | – | – | |
| TMHMM | 103 | 125 | 23 | – | – | |
| Phobius | 105 | 126 | 22 | – | – | |
| Phobius | 127 | 200 | 74 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj6g3v1753120.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1753120.1, powered by CORGI.
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