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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1878760 |
| Transcript ID | Lj6g3v1878760.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protein TRANSPARENT TESTA 12-like [Glycine max] gi|356557907|ref|XP_003547251.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 57 | 57 | – | – | |
| PANTHER | 36 | 466 | 431 | 5.00E-282 | – | |
| PANTHER | 36 | 466 | 431 | 5.00E-282 | – | |
| Phobius | 58 | 79 | 22 | – | – | |
| TMHMM | 58 | 80 | 23 | – | – | |
| CDD | 62 | 466 | 405 | 5.29E-150 | – | |
| TIGRFAM | 72 | 465 | 394 | 2.70E-85 | ||
| Pfam | 72 | 232 | 161 | 1.40E-33 | ||
| Phobius | 80 | 85 | 6 | – | – | |
| Phobius | 86 | 105 | 20 | – | – | |
| Phobius | 106 | 110 | 5 | – | – | |
| Phobius | 111 | 135 | 25 | – | – | |
| Phobius | 136 | 146 | 11 | – | – | |
| TMHMM | 142 | 164 | 23 | – | – | |
| Phobius | 147 | 172 | 26 | – | – | |
| Phobius | 173 | 177 | 5 | – | – | |
| Phobius | 178 | 199 | 22 | – | – | |
| TMHMM | 179 | 198 | 20 | – | – | |
| Phobius | 200 | 210 | 11 | – | – | |
| Phobius | 211 | 233 | 23 | – | – | |
| TMHMM | 211 | 233 | 23 | – | – | |
| Phobius | 234 | 238 | 5 | – | – | |
| Phobius | 239 | 265 | 27 | – | – | |
| TMHMM | 243 | 265 | 23 | – | – | |
| Phobius | 266 | 285 | 20 | – | – | |
| Phobius | 286 | 314 | 29 | – | – | |
| TMHMM | 286 | 305 | 20 | – | – | |
| Pfam | 294 | 454 | 161 | 1.40E-29 | ||
| Phobius | 315 | 319 | 5 | – | – | |
| Phobius | 320 | 340 | 21 | – | – | |
| TMHMM | 320 | 342 | 23 | – | – | |
| Phobius | 341 | 360 | 20 | – | – | |
| Phobius | 361 | 391 | 31 | – | – | |
| TMHMM | 363 | 385 | 23 | – | – | |
| Phobius | 392 | 410 | 19 | – | – | |
| Phobius | 411 | 430 | 20 | – | – | |
| Phobius | 431 | 436 | 6 | – | – | |
| Phobius | 437 | 459 | 23 | – | – | |
| TMHMM | 437 | 459 | 23 | – | – | |
| Phobius | 460 | 467 | 8 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj6g3v1878760.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1878760.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.