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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1879850 |
| Transcript ID | Lj6g3v1879850.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Tobamovirus multiplication 1 isoform 1 [Theobroma cacao] gi|508781403|gb|EOY28659.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 6 | 6 | – | – | |
| TMHMM | 7 | 24 | 18 | – | – | |
| Phobius | 7 | 27 | 21 | – | – | |
| Pfam | 26 | 294 | 269 | 2.70E-139 | ||
| PANTHER | 26 | 294 | 269 | 1.20E-164 | – | |
| PANTHER | 26 | 294 | 269 | 1.20E-164 | – | |
| Phobius | 28 | 38 | 11 | – | – | |
| Phobius | 39 | 64 | 26 | – | – | |
| TMHMM | 39 | 57 | 19 | – | – | |
| Phobius | 65 | 75 | 11 | – | – | |
| Phobius | 76 | 95 | 20 | – | – | |
| TMHMM | 77 | 96 | 20 | – | – | |
| Phobius | 96 | 114 | 19 | – | – | |
| TMHMM | 111 | 133 | 23 | – | – | |
| Phobius | 115 | 134 | 20 | – | – | |
| Phobius | 135 | 145 | 11 | – | – | |
| Phobius | 146 | 168 | 23 | – | – | |
| TMHMM | 146 | 168 | 23 | – | – | |
| Phobius | 169 | 179 | 11 | – | – | |
| TMHMM | 178 | 200 | 23 | – | – | |
| Phobius | 180 | 201 | 22 | – | – | |
| Phobius | 202 | 220 | 19 | – | – | |
| Phobius | 221 | 240 | 20 | – | – | |
| TMHMM | 221 | 243 | 23 | – | – | |
| Phobius | 241 | 259 | 19 | – | – | |
| TMHMM | 256 | 278 | 23 | – | – | |
| Phobius | 260 | 278 | 19 | – | – | |
| Phobius | 279 | 294 | 16 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj6g3v1879850.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1879850.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.