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Lj6g3v1887760.1

Overview

Field Value
Gene ID Lj6g3v1887760
Transcript ID Lj6g3v1887760.1
Lotus japonicus genome version MG20 v3.0
Description
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 81 81
PANTHER 35 682 648 0
PANTHER 35 682 648 0
TMHMM 82 104 23
Phobius 82 105 24
Phobius 106 110 5
Phobius 111 127 17
Phobius 128 224 97
Phobius 225 246 22
Phobius 247 265 19
Phobius 266 283 18
Phobius 284 704 421
Gene3D 336 671 336 5.50E-14
SUPERFAMILY 344 680 337 6.53E-22

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of Lj6g3v1887760.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v1887760.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.