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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1900290 |
| Transcript ID | Lj6g3v1900290.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: MATE efflux family protein 4, chloroplastic-like [Cicer arietinum] gi|502149368|ref|XP_004507499.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 395 | 395 | 3.00E-238 | – | |
| PANTHER | 1 | 395 | 395 | 3.00E-238 | – | |
| Phobius | 1 | 6 | 6 | – | – | |
| TMHMM | 7 | 29 | 23 | – | – | |
| Phobius | 7 | 29 | 23 | – | – | |
| Pfam | 10 | 168 | 159 | 3.10E-13 | ||
| Phobius | 30 | 48 | 19 | – | – | |
| TMHMM | 39 | 61 | 23 | – | – | |
| Phobius | 49 | 69 | 21 | – | – | |
| Phobius | 70 | 80 | 11 | – | – | |
| Phobius | 81 | 104 | 24 | – | – | |
| TMHMM | 82 | 104 | 23 | – | – | |
| Phobius | 105 | 123 | 19 | – | – | |
| TMHMM | 119 | 141 | 23 | – | – | |
| Phobius | 124 | 142 | 19 | – | – | |
| Phobius | 143 | 153 | 11 | – | – | |
| Phobius | 154 | 173 | 20 | – | – | |
| Phobius | 174 | 178 | 5 | – | – | |
| TMHMM | 176 | 198 | 23 | – | – | |
| Phobius | 179 | 200 | 22 | – | – | |
| Phobius | 201 | 220 | 20 | – | – | |
| TMHMM | 221 | 240 | 20 | – | – | |
| Phobius | 221 | 245 | 25 | – | – | |
| Phobius | 246 | 282 | 37 | – | – | |
| Phobius | 283 | 310 | 28 | – | – | |
| TMHMM | 285 | 307 | 23 | – | – | |
| Phobius | 311 | 321 | 11 | – | – | |
| Phobius | 322 | 344 | 23 | – | – | |
| TMHMM | 322 | 344 | 23 | – | – | |
| Phobius | 345 | 355 | 11 | – | – | |
| Phobius | 356 | 375 | 20 | – | – | |
| Phobius | 376 | 397 | 22 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj6g3v1900290.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1900290.1, powered by CORGI.
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