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Lj6g3v1918350.1

Overview

Field Value
Gene ID Lj6g3v1918350
Transcript ID Lj6g3v1918350.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: lipase-like isoform X1 [Cicer arietinum] gi|502078774|ref|XP_004486050.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 3 3
SignalP 1 19 19
Phobius 1 19 19
SignalP 1 21 21
Phobius 4 15 12
PANTHER 8 335 328 1.60E-211
PANTHER 8 335 328 1.60E-211
Phobius 16 19 4
Phobius 20 357 338
Gene3D 34 301 268 1.50E-66
SUPERFAMILY 35 301 267 2.36E-56
CDD 36 256 221 3.57E-60
Pfam 100 238 139 1.80E-37

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Biological process Lipid metabolic process The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.

LORE1 insertions 6

Expression data

Expression pattern

Expression pattern of Lj6g3v1918350.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v1918350.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.