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Lj6g3v1946450.1

Overview

Field Value
Gene ID Lj6g3v1946450
Transcript ID Lj6g3v1946450.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: protein kinase PINOID-like [Cicer arietinum] gi|502078584|ref|XP_004485993.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 32 32 – –
PANTHER
PTHR24351
18 246 229 9.60E-240 –
PANTHER
PTHR24351:SF60
18 246 229 9.60E-240 –
SUPERFAMILY
SSF56112
53 237 185 4.32E-78
IPR011009
Gene3D
G3DSA:3.30.200.20
76 176 101 6.90E-24 –
CDD
cd05574
77 427 351 2.94E-160 –
Pfam
PF00069
79 238 160 1.40E-32
IPR000719
ProSiteProfiles
PS50011
79 406 328 42.902
IPR000719
SMART
SM00220
79 406 328 1.50E-84
IPR000719
Coils
Coil
118 145 28 – –
Gene3D
G3DSA:1.10.510.10
177 238 62 1.20E-54 –
ProSitePatterns
PS00108
211 223 13 –
IPR008271
SUPERFAMILY
SSF56112
290 426 137 4.32E-78
IPR011009
Gene3D
G3DSA:1.10.510.10
291 444 154 1.20E-54 –
PANTHER
PTHR24351
294 427 134 9.60E-240 –
PANTHER
PTHR24351:SF60
294 427 134 9.60E-240 –
Pfam
PF00069
301 406 106 6.30E-20
IPR000719
MobiDBLite
mobidb-lite
427 451 25 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 1

Expression data

Expression pattern

Expression pattern of Lj6g3v1946450.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v1946450.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.