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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1948640 |
| Transcript ID | Lj6g3v1948640.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Early-responsive to dehydration [Medicago truncatula] gi|357447203|ref|XP_003593877.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 718 | 718 | 0 | – | |
| Phobius | 1 | 5 | 5 | – | – | |
| PANTHER | 1 | 718 | 718 | 0 | – | |
| Pfam | 5 | 164 | 160 | 8.10E-34 | ||
| TMHMM | 5 | 27 | 23 | – | – | |
| Phobius | 6 | 27 | 22 | – | – | |
| Phobius | 28 | 80 | 53 | – | – | |
| Phobius | 81 | 107 | 27 | – | – | |
| TMHMM | 85 | 107 | 23 | – | – | |
| Phobius | 108 | 143 | 36 | – | – | |
| TMHMM | 144 | 166 | 23 | – | – | |
| Phobius | 144 | 163 | 20 | – | – | |
| Phobius | 164 | 365 | 202 | – | – | |
| Pfam | 186 | 353 | 168 | 5.80E-36 | ||
| Coils | 283 | 303 | 21 | – | – | |
| Pfam | 364 | 635 | 272 | 1.30E-76 | ||
| Phobius | 366 | 389 | 24 | – | – | |
| TMHMM | 367 | 389 | 23 | – | – | |
| Phobius | 390 | 394 | 5 | – | – | |
| Phobius | 395 | 415 | 21 | – | – | |
| TMHMM | 410 | 432 | 23 | – | – | |
| Phobius | 416 | 421 | 6 | – | – | |
| Phobius | 422 | 438 | 17 | – | – | |
| Phobius | 439 | 457 | 19 | – | – | |
| Phobius | 458 | 478 | 21 | – | – | |
| TMHMM | 458 | 480 | 23 | – | – | |
| Phobius | 479 | 489 | 11 | – | – | |
| Phobius | 490 | 511 | 22 | – | – | |
| TMHMM | 493 | 515 | 23 | – | – | |
| Phobius | 512 | 562 | 51 | – | – | |
| Phobius | 563 | 594 | 32 | – | – | |
| TMHMM | 563 | 594 | 32 | – | – | |
| Phobius | 595 | 614 | 20 | – | – | |
| Phobius | 615 | 635 | 21 | – | – | |
| TMHMM | 615 | 637 | 23 | – | – | |
| Phobius | 636 | 640 | 5 | – | – | |
| TMHMM | 641 | 660 | 20 | – | – | |
| Phobius | 641 | 661 | 21 | – | – | |
| Phobius | 662 | 722 | 61 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of Lj6g3v1948640.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1948640.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.