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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1966960 |
| Transcript ID | Lj6g3v1966960.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: aquaporin NIP1-2-like [Cicer arietinum] gi|502078433|ref|XP_004485943.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 1 | 153 | 153 | 2.49E-41 | ||
| PANTHER | 1 | 152 | 152 | 4.50E-103 | – | |
| Pfam | 1 | 152 | 152 | 4.50E-38 | ||
| PANTHER | 1 | 152 | 152 | 4.50E-103 | ||
| Phobius | 1 | 18 | 18 | – | – | |
| Gene3D | 1 | 153 | 153 | 6.00E-43 | ||
| Phobius | 19 | 39 | 21 | – | – | |
| TMHMM | 23 | 45 | 23 | – | – | |
| PRINTS | 28 | 52 | 25 | 8.30E-23 | ||
| Phobius | 40 | 65 | 26 | – | – | |
| ProSitePatterns | 46 | 54 | 9 | – | ||
| PRINTS | 65 | 84 | 20 | 8.30E-23 | ||
| Phobius | 66 | 88 | 23 | – | – | |
| TMHMM | 66 | 88 | 23 | – | – | |
| Phobius | 89 | 107 | 19 | – | – | |
| TMHMM | 103 | 125 | 23 | – | – | |
| Phobius | 108 | 126 | 19 | – | – | |
| PRINTS | 110 | 128 | 19 | 8.30E-23 | ||
| Phobius | 127 | 132 | 6 | – | – | |
| TMHMM | 132 | 151 | 20 | – | – | |
| Phobius | 133 | 152 | 20 | – | – | |
| PRINTS | 137 | 153 | 17 | 8.30E-23 | ||
| Phobius | 153 | 153 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Channel activity | Enables the energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj6g3v1966960.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1966960.1, powered by CORGI.
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