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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1967030 |
| Transcript ID | Lj6g3v1967030.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: nodulin-26-like [Glycine max] gi|356555459|ref|XP_003546049.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 40 | 40 | – | – | |
| PANTHER | 35 | 266 | 232 | 4.70E-164 | – | |
| PANTHER | 35 | 266 | 232 | 4.70E-164 | ||
| SUPERFAMILY | 36 | 259 | 224 | 1.70E-67 | ||
| Gene3D | 37 | 256 | 220 | 7.10E-71 | ||
| Pfam | 37 | 245 | 209 | 4.50E-63 | ||
| CDD | 39 | 246 | 208 | 1.04E-64 | ||
| PRINTS | 39 | 58 | 20 | 6.10E-46 | ||
| TMHMM | 41 | 63 | 23 | – | – | |
| Phobius | 41 | 63 | 23 | – | – | |
| TIGRFAM | 43 | 245 | 203 | 1.10E-59 | ||
| Phobius | 64 | 68 | 5 | – | – | |
| Phobius | 69 | 89 | 21 | – | – | |
| TMHMM | 73 | 95 | 23 | – | – | |
| PRINTS | 78 | 102 | 25 | 6.10E-46 | ||
| Phobius | 90 | 118 | 29 | – | – | |
| ProSitePatterns | 96 | 104 | 9 | – | ||
| PRINTS | 115 | 134 | 20 | 6.10E-46 | ||
| TMHMM | 116 | 138 | 23 | – | – | |
| Phobius | 119 | 138 | 20 | – | – | |
| Phobius | 139 | 157 | 19 | – | – | |
| Phobius | 158 | 176 | 19 | – | – | |
| TMHMM | 158 | 177 | 20 | – | – | |
| PRINTS | 160 | 178 | 19 | 6.10E-46 | ||
| Phobius | 177 | 187 | 11 | – | – | |
| TMHMM | 184 | 206 | 23 | – | – | |
| Phobius | 188 | 207 | 20 | – | – | |
| PRINTS | 191 | 213 | 23 | 6.10E-46 | ||
| Phobius | 208 | 226 | 19 | – | – | |
| TMHMM | 226 | 248 | 23 | – | – | |
| Phobius | 227 | 248 | 22 | – | – | |
| PRINTS | 228 | 248 | 21 | 6.10E-46 | ||
| Phobius | 249 | 270 | 22 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Channel activity | Enables the energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj6g3v1967030.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1967030.1, powered by CORGI.
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