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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1984390 |
| Transcript ID | Lj6g3v1984390.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protein LST8 homolog isoform X1 [Cicer arietinum] gi|502078371|ref|XP_004485923.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 315 | 315 | 3.70E-202 | – | |
| ProSiteProfiles | 1 | 30 | 30 | 10.041 | ||
| ProSiteProfiles | 1 | 316 | 316 | 45.058 | ||
| CDD | 7 | 285 | 279 | 4.53E-52 | – | |
| SUPERFAMILY | 7 | 305 | 299 | 2.16E-64 | ||
| Gene3D | 7 | 210 | 204 | 2.30E-48 | ||
| ProSitePatterns | 8 | 22 | 15 | – | ||
| SMART | 24 | 62 | 39 | 0.76 | ||
| Pfam | 36 | 62 | 27 | 0.17 | ||
| SMART | 67 | 106 | 40 | 1.60E-09 | ||
| Pfam | 69 | 106 | 38 | 2.50E-08 | ||
| ProSiteProfiles | 74 | 108 | 35 | 14.986 | ||
| PRINTS | 93 | 107 | 15 | 1.20E-08 | ||
| ProSitePatterns | 93 | 107 | 15 | – | ||
| SMART | 109 | 147 | 39 | 3.30E-04 | ||
| Pfam | 112 | 147 | 36 | 0.01 | ||
| ProSiteProfiles | 115 | 156 | 42 | 10.609 | ||
| ProSitePatterns | 134 | 148 | 15 | – | ||
| SMART | 150 | 190 | 41 | 3.3 | ||
| SMART | 200 | 243 | 44 | 1.70E-05 | ||
| Pfam | 202 | 243 | 42 | 3.10E-05 | ||
| ProSiteProfiles | 207 | 245 | 39 | 10.375 | ||
| Gene3D | 211 | 308 | 98 | 5.30E-26 | ||
| ProSitePatterns | 230 | 244 | 15 | – | ||
| PRINTS | 230 | 244 | 15 | 1.20E-08 | ||
| SMART | 246 | 285 | 40 | 4.10E-07 | ||
| Pfam | 251 | 285 | 35 | 1.30E-05 | ||
| ProSiteProfiles | 253 | 294 | 42 | 13.416 | ||
| PRINTS | 272 | 286 | 15 | 1.20E-08 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj6g3v1984390.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1984390.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.