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Lj6g3v1984530.3

Overview

Field Value
Gene ID Lj6g3v1984530
Transcript ID Lj6g3v1984530.3
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: shaggy-related protein kinase eta-like [Glycine max] gi|356507479|ref|XP_003522493.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24057:SF5
1 256 256 2.40E-226 –
PANTHER
PTHR24057
1 256 256 2.40E-226 –
CDD
cd14137
38 256 219 1.42E-159 –
Gene3D
G3DSA:3.30.200.20
38 115 78 1.40E-22 –
SUPERFAMILY
SSF56112
39 256 218 2.43E-71
IPR011009
Pfam
PF00069
40 252 213 2.70E-55
IPR000719
SMART
SM00220
40 255 216 1.00E-54
IPR000719
ProSiteProfiles
PS50011
40 256 217 40.23
IPR000719
ProSitePatterns
PS00107
46 70 25 –
IPR017441
Gene3D
G3DSA:1.10.510.10
116 255 140 6.00E-46 –
ProSitePatterns
PS00108
161 173 13 –
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 14

Expression data

Expression pattern

Expression pattern of Lj6g3v1984530.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v1984530.3, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.