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| Field | Value |
|---|---|
| Gene ID | Lj6g3v2044540 |
| Transcript ID | Lj6g3v2044540.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable polyol transporter 4-like [Glycine max] gi|356555132|ref|XP_003545891.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 382 | 382 | 1.60E-287 | – | |
| CDD | 1 | 349 | 349 | 3.53E-19 | ||
| ProSiteProfiles | 1 | 353 | 353 | 35.708 | ||
| SUPERFAMILY | 1 | 361 | 361 | 2.35E-51 | ||
| PANTHER | 1 | 382 | 382 | 1.60E-287 | – | |
| Phobius | 1 | 11 | 11 | – | – | |
| Pfam | 2 | 364 | 363 | 6.20E-92 | ||
| Gene3D | 2 | 106 | 105 | 3.80E-14 | – | |
| TIGRFAM | 5 | 360 | 356 | 1.90E-88 | ||
| TMHMM | 10 | 32 | 23 | – | – | |
| PRINTS | 11 | 30 | 20 | 7.80E-20 | ||
| Phobius | 12 | 32 | 21 | – | – | |
| ProSitePatterns | 16 | 41 | 26 | – | ||
| Phobius | 33 | 37 | 5 | – | – | |
| Phobius | 38 | 61 | 24 | – | – | |
| TMHMM | 39 | 61 | 23 | – | – | |
| Phobius | 62 | 72 | 11 | – | – | |
| Phobius | 73 | 96 | 24 | – | – | |
| TMHMM | 74 | 96 | 23 | – | – | |
| Phobius | 97 | 201 | 105 | – | – | |
| Coils | 123 | 143 | 21 | – | – | |
| Gene3D | 166 | 364 | 199 | 1.60E-19 | – | |
| PRINTS | 175 | 185 | 11 | 7.80E-20 | ||
| Phobius | 202 | 224 | 23 | – | – | |
| TMHMM | 202 | 224 | 23 | – | – | |
| ProSitePatterns | 220 | 237 | 18 | – | ||
| Phobius | 225 | 230 | 6 | – | – | |
| Phobius | 231 | 253 | 23 | – | – | |
| TMHMM | 234 | 256 | 23 | – | – | |
| Phobius | 254 | 258 | 5 | – | – | |
| Phobius | 259 | 287 | 29 | – | – | |
| TMHMM | 263 | 285 | 23 | – | – | |
| PRINTS | 265 | 286 | 22 | 7.80E-20 | ||
| Phobius | 288 | 298 | 11 | – | – | |
| PRINTS | 288 | 300 | 13 | 7.80E-20 | ||
| Phobius | 299 | 319 | 21 | – | – | |
| Phobius | 320 | 324 | 5 | – | – | |
| TMHMM | 325 | 347 | 23 | – | – | |
| Phobius | 325 | 349 | 25 | – | – | |
| Phobius | 350 | 387 | 38 | – | – | |
| Coils | 353 | 373 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj6g3v2044540.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v2044540.1, powered by CORGI.
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