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| Field | Value |
|---|---|
| Gene ID | Lj6g3v2079260 |
| Transcript ID | Lj6g3v2079260.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Cotton fiber expressed protein [Medicago truncatula] gi|357446343|ref|XP_003593449.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 22 | 22 | – | – | |
| PANTHER | 1 | 147 | 147 | 7.00E-30 | – | |
| PANTHER | 1 | 147 | 147 | 7.00E-30 | – | |
| Phobius | 1 | 5 | 5 | – | – | |
| Phobius | 6 | 17 | 12 | – | – | |
| TMHMM | 7 | 29 | 23 | – | – | |
| Phobius | 18 | 22 | 5 | – | – | |
| Phobius | 23 | 45 | 23 | – | – | |
| Pfam | 32 | 64 | 33 | 1.60E-11 | ||
| TMHMM | 34 | 56 | 23 | – | – | |
| Phobius | 46 | 66 | 21 | – | – | |
| Phobius | 67 | 147 | 81 | – | – | |
| TMHMM | 147 | 169 | 23 | – | – | |
| Phobius | 148 | 169 | 22 | – | – | |
| Phobius | 170 | 172 | 3 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj6g3v2079260.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v2079260.1, powered by CORGI.
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