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| Field | Value |
|---|---|
| Gene ID | Lj6g3v2116840 |
| Transcript ID | Lj6g3v2116840.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: equilibrative nucleoside transporter 2-like [Glycine max] gi|356557654|ref|XP_003547130.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | – | – | |
| PANTHER | 2 | 417 | 416 | 9.40E-290 | ||
| PANTHER | 2 | 417 | 416 | 9.40E-290 | – | |
| PIRSF | 4 | 414 | 411 | 1.40E-82 | ||
| SUPERFAMILY | 15 | 403 | 389 | 9.94E-10 | ||
| Phobius | 20 | 43 | 24 | – | – | |
| TMHMM | 21 | 40 | 20 | – | – | |
| Phobius | 44 | 54 | 11 | – | – | |
| Phobius | 55 | 73 | 19 | – | – | |
| TMHMM | 55 | 74 | 20 | – | – | |
| Phobius | 74 | 84 | 11 | – | – | |
| Phobius | 85 | 105 | 21 | – | – | |
| TMHMM | 87 | 106 | 20 | – | – | |
| Phobius | 106 | 110 | 5 | – | – | |
| Phobius | 111 | 127 | 17 | – | – | |
| TMHMM | 111 | 133 | 23 | – | – | |
| Pfam | 124 | 410 | 287 | 7.80E-33 | ||
| Phobius | 128 | 138 | 11 | – | – | |
| Phobius | 139 | 164 | 26 | – | – | |
| TMHMM | 146 | 168 | 23 | – | – | |
| Phobius | 165 | 183 | 19 | – | – | |
| TMHMM | 183 | 205 | 23 | – | – | |
| Phobius | 184 | 205 | 22 | – | – | |
| Phobius | 206 | 263 | 58 | – | – | |
| TMHMM | 257 | 279 | 23 | – | – | |
| Phobius | 264 | 283 | 20 | – | – | |
| Phobius | 284 | 294 | 11 | – | – | |
| TMHMM | 294 | 316 | 23 | – | – | |
| Phobius | 295 | 315 | 21 | – | – | |
| Phobius | 316 | 326 | 11 | – | – | |
| Phobius | 327 | 346 | 20 | – | – | |
| TMHMM | 328 | 345 | 18 | – | – | |
| Phobius | 347 | 351 | 5 | – | – | |
| Phobius | 352 | 376 | 25 | – | – | |
| TMHMM | 355 | 377 | 23 | – | – | |
| Phobius | 377 | 387 | 11 | – | – | |
| Phobius | 388 | 411 | 24 | – | – | |
| TMHMM | 390 | 412 | 23 | – | – | |
| Phobius | 412 | 417 | 6 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleoside transmembrane transporter activity | Enables the transfer of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide) from one side of a membrane to the other. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Nucleoside transmembrane transport | The directed movement of nucleoside across a membrane. |
Expression pattern of Lj6g3v2116840.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v2116840.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.