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| Field | Value |
|---|---|
| Gene ID | Lj6g3v2116850 |
| Transcript ID | Lj6g3v2116850.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: equilibrative nucleotide transporter 3-like isoform X1 [Cicer arietinum] gi|502077578|ref|XP_004485692.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | – | – | |
| PANTHER | 1 | 419 | 419 | 4.50E-281 | – | |
| PANTHER | 1 | 419 | 419 | 4.50E-281 | ||
| PIRSF | 3 | 417 | 415 | 7.00E-83 | ||
| TMHMM | 19 | 41 | 23 | – | – | |
| Phobius | 21 | 44 | 24 | – | – | |
| SUPERFAMILY | 23 | 406 | 384 | 2.09E-09 | ||
| Phobius | 45 | 55 | 11 | – | – | |
| Phobius | 56 | 75 | 20 | – | – | |
| TMHMM | 56 | 73 | 18 | – | – | |
| Phobius | 76 | 86 | 11 | – | – | |
| TMHMM | 85 | 107 | 23 | – | – | |
| Phobius | 87 | 106 | 20 | – | – | |
| Phobius | 107 | 111 | 5 | – | – | |
| PRINTS | 107 | 127 | 21 | 1.40E-05 | ||
| TMHMM | 112 | 134 | 23 | – | – | |
| Phobius | 112 | 132 | 21 | – | – | |
| Pfam | 125 | 412 | 288 | 4.70E-32 | ||
| Phobius | 133 | 143 | 11 | – | – | |
| Phobius | 144 | 162 | 19 | – | – | |
| TMHMM | 147 | 169 | 23 | – | – | |
| Phobius | 163 | 181 | 19 | – | – | |
| Phobius | 182 | 206 | 25 | – | – | |
| TMHMM | 184 | 206 | 23 | – | – | |
| Phobius | 207 | 265 | 59 | – | – | |
| Phobius | 266 | 285 | 20 | – | – | |
| TMHMM | 270 | 287 | 18 | – | – | |
| Phobius | 286 | 296 | 11 | – | – | |
| TMHMM | 297 | 316 | 20 | – | – | |
| Phobius | 297 | 317 | 21 | – | – | |
| Phobius | 318 | 328 | 11 | – | – | |
| Phobius | 329 | 348 | 20 | – | – | |
| TMHMM | 329 | 346 | 18 | – | – | |
| Phobius | 349 | 353 | 5 | – | – | |
| PRINTS | 353 | 369 | 17 | 1.40E-05 | ||
| Phobius | 354 | 378 | 25 | – | – | |
| TMHMM | 356 | 378 | 23 | – | – | |
| Phobius | 379 | 389 | 11 | – | – | |
| PRINTS | 390 | 414 | 25 | 1.40E-05 | ||
| Phobius | 390 | 413 | 24 | – | – | |
| TMHMM | 390 | 412 | 23 | – | – | |
| Phobius | 414 | 419 | 6 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleoside transmembrane transporter activity | Enables the transfer of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide) from one side of a membrane to the other. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Nucleoside transmembrane transport | The directed movement of nucleoside across a membrane. |
Expression pattern of Lj6g3v2116850.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v2116850.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.