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| Field | Value |
|---|---|
| Gene ID | Lj6g3v2171910 |
| Transcript ID | Lj6g3v2171910.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protein spinster homolog 1-like [Glycine max] gi|356546730|ref|XP_003541776.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | 1 | 339 | 339 | 5.50E-09 | ||
| PANTHER | 1 | 89 | 89 | 2.60E-166 | – | |
| Pfam | 1 | 249 | 249 | 5.70E-20 | ||
| Phobius | 1 | 28 | 28 | – | – | |
| PANTHER | 1 | 89 | 89 | 2.60E-166 | – | |
| SUPERFAMILY | 2 | 91 | 90 | 1.44E-31 | ||
| Gene3D | 2 | 81 | 80 | 1.60E-10 | – | |
| Phobius | 29 | 48 | 20 | – | – | |
| TMHMM | 30 | 52 | 23 | – | – | |
| Phobius | 49 | 59 | 11 | – | – | |
| Phobius | 60 | 79 | 20 | – | – | |
| Phobius | 80 | 159 | 80 | – | – | |
| PANTHER | 129 | 382 | 254 | 2.60E-166 | – | |
| PANTHER | 129 | 382 | 254 | 2.60E-166 | – | |
| SUPERFAMILY | 142 | 340 | 199 | 1.44E-31 | ||
| Gene3D | 155 | 339 | 185 | 1.60E-12 | – | |
| TMHMM | 160 | 182 | 23 | – | – | |
| Phobius | 160 | 181 | 22 | – | – | |
| Phobius | 182 | 196 | 15 | – | – | |
| Phobius | 197 | 221 | 25 | – | – | |
| TMHMM | 197 | 219 | 23 | – | – | |
| Phobius | 222 | 227 | 6 | – | – | |
| TMHMM | 226 | 248 | 23 | – | – | |
| Phobius | 228 | 248 | 21 | – | – | |
| Phobius | 249 | 253 | 5 | – | – | |
| TMHMM | 253 | 275 | 23 | – | – | |
| Phobius | 254 | 278 | 25 | – | – | |
| Phobius | 279 | 289 | 11 | – | – | |
| TMHMM | 287 | 309 | 23 | – | – | |
| Phobius | 290 | 312 | 23 | – | – | |
| Phobius | 313 | 323 | 11 | – | – | |
| Phobius | 324 | 343 | 20 | – | – | |
| TMHMM | 324 | 346 | 23 | – | – | |
| Phobius | 344 | 386 | 43 | – | – | |
| MobiDBLite | 356 | 386 | 31 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj6g3v2171910.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v2171910.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.