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| Field | Value |
|---|---|
| Gene ID | Lj6g3v2218790 |
| Transcript ID | Lj6g3v2218790.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: beta-xylosidase/alpha-L-arabinofuranosidase 1-like [Glycine max] gi|356558612|ref|XP_003547598.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 8 | 8 | – | – | |
| SignalP | 1 | 31 | 31 | – | – | |
| SignalP | 1 | 24 | 24 | – | – | |
| Phobius | 1 | 24 | 24 | – | – | |
| Phobius | 9 | 19 | 11 | – | – | |
| PANTHER | 12 | 575 | 564 | 0 | – | |
| PANTHER | 12 | 575 | 564 | 0 | ||
| Phobius | 20 | 24 | 5 | – | – | |
| Phobius | 25 | 575 | 551 | – | – | |
| Gene3D | 45 | 371 | 327 | 1.10E-106 | ||
| SUPERFAMILY | 45 | 399 | 355 | 7.48E-91 | ||
| Pfam | 112 | 354 | 243 | 6.20E-39 | ||
| PRINTS | 116 | 135 | 20 | 8.50E-07 | ||
| PRINTS | 206 | 222 | 17 | 8.50E-07 | ||
| PRINTS | 280 | 298 | 19 | 8.50E-07 | ||
| Gene3D | 386 | 575 | 190 | 2.50E-45 | ||
| SUPERFAMILY | 400 | 575 | 176 | 2.22E-31 | ||
| Pfam | 400 | 575 | 176 | 8.80E-39 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of Lj6g3v2218790.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v2218790.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.