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| Field | Value |
|---|---|
| Gene ID | Lj6g3v2245620 |
| Transcript ID | Lj6g3v2245620.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: chloride channel protein CLC-e [Vitis vinifera] gi|225428374|ref|XP_002280150.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 41 | 41 | – | – | |
| Gene3D | 2 | 115 | 114 | 6.40E-25 | ||
| Pfam | 2 | 113 | 112 | 1.60E-21 | ||
| PANTHER | 3 | 118 | 116 | 4.50E-37 | – | |
| PANTHER | 3 | 118 | 116 | 4.50E-37 | – | |
| SUPERFAMILY | 3 | 116 | 114 | 5.10E-21 | ||
| Phobius | 42 | 66 | 25 | – | – | |
| Phobius | 67 | 85 | 19 | – | – | |
| Phobius | 86 | 103 | 18 | – | – | |
| Phobius | 104 | 120 | 17 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Voltage-gated chloride channel activity | Enables the transmembrane transfer of a chloride ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded. | ||
| Biological process | Chloride transport | The directed movement of chloride into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj6g3v2245620.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v2245620.1, powered by CORGI.
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