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Lj6g3v2255760.1

Overview

Field Value
Gene ID Lj6g3v2255760
Transcript ID Lj6g3v2255760.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: COP9 signalosome complex subunit 8-like isoform X1 [Cicer arietinum] gi|502077005|ref|XP_004485521.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR13339
1 197 197 7.30E-95
IPR033205
Pfam
PF10075
37 176 140 3.50E-35
IPR033464

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000338
Biological process Protein deneddylation The removal of a ubiquitin-like protein of the NEDD8 type from a protein.
Subterm of
GO:0008180
Cellular component COP9 signalosome A protein complex that catalyzes the deneddylation of proteins, including the cullin component of SCF ubiquitin E3 ligase; deneddylation increases the activity of cullin family ubiquitin ligases. The signalosome is involved in many regulatory process, including some which control development, in many species; also regulates photomorphogenesis in plants; in many species its subunits are highly similar to those of the proteasome.
Subterm of
GO:0010387
Biological process COP9 signalosome assembly The aggregation, arrangement and bonding together of a set of components to form a COP9 signalosome.
Subterm of

Genome browser

LORE1 insertions 5

Expression data

Expression pattern

Expression pattern of Lj6g3v2255760.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v2255760.1, powered by CORGI.

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