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| Field | Value |
|---|---|
| Gene ID | LotjaGi0g1v0001200 |
| Transcript ID | LotjaGi0g1v0001200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; TAIR: AT1G10280.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; Swiss-Prot: sp|E9Q4F7|ANR11_MOUSE Ankyrin repeat domain-containing protein 11; TrEMBL-Plants: tr|A0A151T894|A0A151T894_CAJCA Uncharacterized protein; Found in the gene: LotjaGi0g1v0001200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr0:1640514..1643761) extracted from Lotus japonicus Gifu genome v1.2.
GCCGTAACTGGATTTACAAGAAAGTAGTTTGGACTTTGGATTTTTTCCAGTTTAGATCATGTAAACCAGTTTTTCTTGAC ACTCCTACGTGCGAGTGGTGGTGCTAGGATGGGATAAGCACTTTCCCTTTCCAACCGAAAAACAGTAAAAAACAAAAACA GAGAGAGAAGCGACAACAGCAATTGTGATTGTCCTCCACTTTGTCTTCCACACAGCTCCTTTTTCCATACATTGATCGAT TTGATTTGAGATATCGATTCATCGTTTCCTCTCCATCCTCCCGATCGATCCATTTCTGTGTGTGTTCTGTGATCGGCCAC AACAATTTATTATTCAATTCAATCCTAGTTGTGGTGGTGGTGGGCCCAAGTGACATTCATGGTTCAGTTTGAGTGAAATT ATAAAAATACATTGGGGGTAATCGCGGTGGCTGGCGGGTGGTGGATGGCAAGGATGCGAGTTGGAGAGGGAAAGGAAAGG GAGAGGGAAAGGGAAAGGGAAAGAGAAAGGGAAGAAGGAGGAATTGTGAATGTGATTGGAGGAGAAAAAGAAAACCACGT TGGTTTGCTTAGATTGGCACGGATTGTAACATTTCTGGTTGTATTTGCAGCAGGTGTTGTGATTGGTCTAACCACCAGTT CTCACATTAACAACACCCATTTCATTTCACAATACACCTCTGATGTTGGTGTTGGTGTTGGTGTTGTCAACCATGTAAAT GTCCTCAATTGCACACCCACCCCCACACCCCCACCAACACCCACACCTTCACCTTCACCCCCTCAACCATCTCCTCTCGA CATGCAAACCTTTCTTCATCCCACCACCAACAACCTCAGCCATCCCATGTCCGATGAGGAGCTTTTCTGGAGAGCTTCCT TGGTCCCCAAGAAACCAGCCTACCCTTACATGAGAATACCCAAAGTGGCTTTCATGTTTCTCACCAGGGGTCCCTTGCCC ATGTTGCCCCTCTGGGAGAGATTCTTCCACGGCCACACGCCTCTCTTCAACATCTACGTCCATGCACCCCCCACGTACTT TCTCAATGTTTCCACTTCTTCCCCCTTCTATGGACGCAACATCCCAAGTCAGGTACCTACCTATCTCAACCCCTGCTATT GGATGTTCAACAAACAGCTTAATTACTTTACTCACTGAGTGTGTTGTGTTCACCTCTCACTTACTATCACTCAATACATT TCAGTTCATACTTAACATTTGAAAGGTTATGGAAGCTCCTAACTATACTTACAAGTTTCGTGTTCATCGTTATATAGTAT TTGAGAAATGCTTGCTAGTTTTGGTAGACTCCTCTGCTAAATCATGTTCAACAAACTCTTGGGTGTCATAATTGTTCCCT AGGGATAGTACTTAAAGTAACATGCTTAAATGCTTAATATTGTTCAACTCCATTATTGATAGCTAGTCTGAAAACCGCTA ATAAACTCAGGAACTGAATTGATTAGATCTTACAAGCATACTGTTGATGTTATTGCTTAGCAGGGTCTTCCATGCTTCTG AAACATGCTATACTTGTGTAATTAGGTAAGTGAGAAACCGTGTTTATACTAAATAAATGGCAGTGTTGAGATAAGTAAAA GCTTCAAAAGGAAAGGGACATGGGTTGAAAATGATCATTTTTGGCAGGAGAGAAGAAGAATGGTTAGGTGAAGTGATAGA TTCTTAACCAAAAAATGAGGTTATGGCTTCAAATTCATGTTTCTGGCATGAGATGGTGAGATATTGAAATAGGTTCTATG ATCTGTAAATTTTAACAATTTGTAGAGGGAAACTATAAAGATTCAGATTTTCTTAATCTTGTGGCAAATGACAATGATAA TTCCCTTAAATTATAATCACGTTTTGCATTTAAAAAATGTAAGCAGAGTTGCTCGTCTGACCATGTCTCTATTTTATTTT GTAGTTGATATGATGTGTATGTTTTTTATAATGTGGATGGAGAATACGTCTTCATCTACCCTTTTTTGTATTTCTAGTAA CTTAAATGGTAAACTAAGATAGTTGTTATTTGTCAAGGACTGGTACAAATAAAATTTAAAGATGCATATCCTTTCCCTCT ATCTTAACAGAGTTTTTGTCATTTACAAAAATGAAGAATATTCCCTCTCTGGTTTTTATGAGTAATTGAGTGTTTCTTTC TTTTTCTCTTTTTTCCTTCTTAATGTAGCCGAATTCTTCTATATTCTTATGAGTAGTGTTTGACATGTCTTCTTCAGGAT GTTTCATGGGGAACAGTTACGCTAGCAGATGCTGAGAGGCGGCTTTTAGCCAATGCTCTTCTTGACTTTTCGAATGAGCG GTTTGTTCTCCTTTCAGAGAGTTGCATCCCAGTCTACAACTTCCCTACTGTTTACAGATATCTCATTGATTCTGCACACA GCTTTGTAGAGTCATATGATGACCCTTCCCGTTACGGGCGTGGCCGCTACAGCCGAAGTATGCTTCCTCATATTCAGCTC AAGCACTGGAGGAAAGGGTCTCAGTGGTTTGAACTCAACCGTGCTCTGGCTGTTTATGTAGTCTCTGACACCCAATATTA TACCCTCTTCCGTAAATATTGTAAGCCTGCTTGCTACCCGGATGAACACTACATTCCAACCTTCCTAAATATGTTTCATG GTTCACTTAATTCAAACAGGTCAGTGACATGGGTTGACTGGACAATGCTTGGTCCTCATCCAGCAACCTATGGAAGAGCC AATATAACTATTGGTTTTCTACAGGCTATAAGGAACAATGGATCCCTTTGTCGATACAATTCAGAGATGACATCTATTTG TTTCCTCTTTGCTCGCAAGTTTGATCAGAGTGCTCTGGAGCCCTTGCTTAACCTTTCTTTACAAGTGATGAAATTTTGAT TAGTTTTTAGTGTACAAGAGATGGGATAACTTCATTTTTCGGTCCCTAGATTTTGGTAGACAATTTAACTAATTCAATAC TAAATCCTTTTGCATTGGTATAGCTGTACATGCATTGTTAGAGAATTTTGTGTTCTCTGTTAGAGAACAACATTTGGTTG CAGAAACTGCATTTTATTCCTTCGAAGAAGAAATATACGGTTTAGATAAGTGAAAATTTGTTTAGGTTTCAGCTAGTTAA CTACTTCTACCCTGAGGTGTCTCAAACTAGGGGTGACATGTGGCTTTCTTTCATACTCAAATTATGAAGTTAACTTTCTT TATGCCTGGAAATACGAGACAAAATATGCTCATTGACGTGAAATTTCC
CDS sequence (LotjaGi0g1v0001200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAAGGATGCGAGTTGGAGAGGGAAAGGAAAGGGAGAGGGAAAGGGAAAGGGAAAGAGAAAGGGAAGAAGGAGGAAT TGTGAATGTGATTGGAGGAGAAAAAGAAAACCACGTTGGTTTGCTTAGATTGGCACGGATTGTAACATTTCTGGTTGTAT TTGCAGCAGGTGTTGTGATTGGTCTAACCACCAGTTCTCACATTAACAACACCCATTTCATTTCACAATACACCTCTGAT GTTGGTGTTGGTGTTGGTGTTGTCAACCATGTAAATGTCCTCAATTGCACACCCACCCCCACACCCCCACCAACACCCAC ACCTTCACCTTCACCCCCTCAACCATCTCCTCTCGACATGCAAACCTTTCTTCATCCCACCACCAACAACCTCAGCCATC CCATGTCCGATGAGGAGCTTTTCTGGAGAGCTTCCTTGGTCCCCAAGAAACCAGCCTACCCTTACATGAGAATACCCAAA GTGGCTTTCATGTTTCTCACCAGGGGTCCCTTGCCCATGTTGCCCCTCTGGGAGAGATTCTTCCACGGCCACACGCCTCT CTTCAACATCTACGTCCATGCACCCCCCACGTACTTTCTCAATGTTTCCACTTCTTCCCCCTTCTATGGACGCAACATCC CAAGTCAGGATGTTTCATGGGGAACAGTTACGCTAGCAGATGCTGAGAGGCGGCTTTTAGCCAATGCTCTTCTTGACTTT TCGAATGAGCGGTTTGTTCTCCTTTCAGAGAGTTGCATCCCAGTCTACAACTTCCCTACTGTTTACAGATATCTCATTGA TTCTGCACACAGCTTTGTAGAGTCATATGATGACCCTTCCCGTTACGGGCGTGGCCGCTACAGCCGAAGTATGCTTCCTC ATATTCAGCTCAAGCACTGGAGGAAAGGGTCTCAGTGGTTTGAACTCAACCGTGCTCTGGCTGTTTATGTAGTCTCTGAC ACCCAATATTATACCCTCTTCCGTAAATATTGTAAGCCTGCTTGCTACCCGGATGAACACTACATTCCAACCTTCCTAAA TATGTTTCATGGTTCACTTAATTCAAACAGGTCAGTGACATGGGTTGACTGGACAATGCTTGGTCCTCATCCAGCAACCT ATGGAAGAGCCAATATAACTATTGGTTTTCTACAGGCTATAAGGAACAATGGATCCCTTTGTCGATACAATTCAGAGATG ACATCTATTTGTTTCCTCTTTGCTCGCAAGTTTGATCAGAGTGCTCTGGAGCCCTTGCTTAACCTTTCTTTACAAGTGAT GAAATTTTGA
Protein sequence (LotjaGi0g1v0001200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MARMRVGEGKEREREREREREREEGGIVNVIGGEKENHVGLLRLARIVTFLVVFAAGVVIGLTTSSHINNTHFISQYTSD VGVGVGVVNHVNVLNCTPTPTPPPTPTPSPSPPQPSPLDMQTFLHPTTNNLSHPMSDEELFWRASLVPKKPAYPYMRIPK VAFMFLTRGPLPMLPLWERFFHGHTPLFNIYVHAPPTYFLNVSTSSPFYGRNIPSQDVSWGTVTLADAERRLLANALLDF SNERFVLLSESCIPVYNFPTVYRYLIDSAHSFVESYDDPSRYGRGRYSRSMLPHIQLKHWRKGSQWFELNRALAVYVVSD TQYYTLFRKYCKPACYPDEHYIPTFLNMFHGSLNSNRSVTWVDWTMLGPHPATYGRANITIGFLQAIRNNGSLCRYNSEM TSICFLFARKFDQSALEPLLNLSLQVMKF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 43 | 43 | - | – | |
| PANTHER | 39 | 429 | 391 | 1.8E-191 | – | |
| PANTHER | 39 | 429 | 391 | 1.8E-191 | – | |
| TMHMM | 44 | 66 | 23 | - | – | |
| Phobius | 44 | 62 | 19 | - | – | |
| Phobius | 63 | 429 | 367 | - | – | |
| MobiDBLite | 96 | 125 | 30 | - | – | |
| MobiDBLite | 97 | 119 | 23 | - | – | |
| Pfam | 161 | 388 | 228 | 6.8E-83 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi0g1v0001200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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