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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0008000 |
| Transcript ID | LotjaGi1g1v0008000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain-containing protein; TAIR: AT5G48130.1 Phototropic-responsive NPH3 family protein; Swiss-Prot: sp|Q9LUB9|Y5813_ARATH BTB/POZ domain-containing protein At5g48130; TrEMBL-Plants: tr|A0A0B2SQ01|A0A0B2SQ01_GLYSO BTB/POZ domain-containing protein; Found in the gene: LotjaGi1g1v0008000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:1058630..1062342) extracted from Lotus japonicus Gifu genome v1.2.
ATTACATACACTAACTTGAACTACAAGATTGATATGGTAGGAAGCATGAAAAAGGCACCATATTCTATTGGCCGAGGCCG CCAAGTTGTAGCACAAGTATTCAACTTCCCAACATTCAAGAACGTTTTTGAAGCCTTAAAATTTGGACTTCGAGTTTCAC TCGTGTGCATGTTGACTTTGACTACATTTAGATGAATGAATAATAGTAGAAAAAGCTTGCAAGAATGTGTTGGGGACAAA CCCATCAAATCCCACCTCTTTTCTTACTTCCACTCCTTCTTCACAAAACAGCTGGTTTTCCTTCACAGATAAGGATTCAT ATCAGCATCATTCTTCTTTCTTTTTGCAAAGTCACATTCATAGTTAGAACCAATAGTAGCCTTTCATGGATATTGTGAGC CCAAAAGATTATTCTGTGTCTTCAAGTCCTTACTCTTCACCCAACATAGGGGTCCTGCTCAAAATTAAGGTCATTACATG GTAAGATGATAGATCATGTTCATGTAACTAATGAGATATTGATGAGATTTTGTGATATATTACTGAGACACTGATGCAGA TATTGATGAGATTTTGTGACATATTACTGAGACACTAGTGCAAATATTGATGATATTAATTATCTCATTATCATGCCATG TCTTGTAAGATGTCTGCAGTTTATCTCATGAGTACTCATGAATTTTTTTGCAATTTTGTCACAGGAGTCAAGAGACTGGT TTTCCTGTGTCTGTCAGAGTTAGAGTTAAAGACAAATTGTTCAATCTCCACAAGGTAAGTTGCATAACAATGAAATCAAA TGATATTTCCCTTGAAAGTTGTATAGGATAATCTGGGAATATGGAAACTGATTTAAGTTACCACATATTCCTAATTTGAT AATATAGCCCTTCTTATACCCAGATGGCCAGATTCTCCTAGTGTTAACTTATGTTTTTTTTTTTTAATATGTTATATTGA TTGCAGCTTCCTCTGACTTCAAAGAGTGGATACTTCAAGAAGAGGCTAAATGACACGTCTGAGATTGAACTGCCAGAAAC TTTCCCTGGAGGACCAGAAGCCTTTGAGATGATTGCCTTGTTTGTTTATGGATCCTCCACATTGATTGACCCTTTCAATG TAGCAGCACTGAGGTGTGCAGCAGAGTTTCTTGAAATGACTGAAGAACACTGTTCTGGCAACCTTTGTGAAAGGTTTGAC CTTTACCTGAACCAAGTTGTGTTGCAAAACTGGGATGACACACTCATTGCACTGCAAAGGTGCCAAATGCTGCTTCCTTG GTCTGAGGATCTTCTGATAGTGAGTCGCTGCATCGAATCTCTCGCATTCATGGCTTGCATGGAGATCCTTGATCCTGAGA GAATGAGAGACACAACACAAGTTGTTACATTGGAAGAACTAGCTTCCCAAGCTTGGAACTGTGAAATGATAAGCCAAGAG CTTTGGATTAAGGATCTGATTGCTCTGCCTTTTGGTTTTTTCAAAAGGGTCATAGGATCTTTGAGGAGACAAGGGATGAA AGAGAAGTATGTGAGCACAATCATTGTTTTCTATGCAAACAAGTGGGTGCTTTCTGAAAAGACACTCCAATTTTGTGAGA AGATCAATGGAGATGGCAACAAAGGTACTTCAGGATTTCTACAAGGTGTTGTTGATCTTCTTCCAAGAGGTGATAAGGGT AGGAAAGTGATTCCTGTTGGATTCTACTTTGCCTTGCTTTCAAGATCTCTTGAGTTTGGATTGAGAATTGAAAGTAAAGC AAAGCTGCAAGACCAGATTGCATCAATGTTGCACTTTGCTCAAGTGGAGGATTTTCTTCTTCCTGAAAGTGGTACAGTGT CAGTGTCCTCTAGCTTGGAGTTGGAAACCATGGAAAGCATAGTTTCAGCATATGTAGTATCCAACTCACACATGAACCAC ACCCCAGAAGCTAGCAATTTCAGGGTTGCACAACTATGGGATGAGTATCTATCCAATGTGGCTGCAGATCCAAACATGGC ACCTCAGAGATTCATGGAACTCATTGAAAGGGTGCCACCATCTTATAGACAGAATCATTATCCACTCTATAGGGCAATCG ACAACTTTCTCAAGGTAATGAATTATTCAAAAGTTTCAGCATTCATCAAAAGTAACTTAAACATGTTGGATTAAAGTAAA CATCATTAGGTTCATTGAACATGCTGTCATGCCAACATTGATGCCATCTATTTACAACATTTCATGGAATTTGCATGACT TCACCAGGTGGTCTAATTGAAATTTTTTGAACGAATTGAAATTAAGAGATTAATAACATGTTCGGTTCTACAATGATATG CACTAGAATCACTTATGATTAGAAGCTACGAGTCTTAGCTTCTGAGTAAACATCCTTTGGATTCTGTGTTGATTGTGATA TCAGACGTGCTATAACATCAATGATAGGATCATGATCCTCTAAAATAGGAGAAATAATGAGTAATAACTAGTTGCAAGCT TGGTGGTATCTCATTACACAACTTACCAAAAACCAAATGAAATCATCAACAAATACCAATGTAATTTCAGCCTTACTGTT TAGGTGCATATTTTGCTTTTCACTAATGATACTTAGATATCCAAACAGTAACGGTTAAACATCTGACAGACACCTCATTT TTCTCTCTCTATCTCTCACTTCTTATCGATCACATTATATATCATATTTAGTACTTTTGTCTCTTATTTTCTTTTATTAC TCTGAGTATCTACTGGGTGTCTACACTATGCTGATGTTCAGATGTTCACAAATCATTTTCCTTTTTGCTGTAGACACATC CAAGTATATCCCAAGATGACAAGGGAGCAGTGTGCAAATATCTTGACTGTCAAAGATTATCACAAGAGGCATGCATTGAA GCTGTTCAAAACGAGTTGATGCCTCTAAGACTAATTGTCCAAGCCCTTTTTGTTCAACAACTCAACACTCACAAAGTATT CAAAGAATGCTCAGATTCATTTAGATATGCACAATGTGGAGAGTTATCAGGAAGCATACCAAACTCTAGTCAGTGCCCAT ATTCTGCAAGCCAGAATCTAGTAGAAAGCCCATACACTGATGGGCCTGATCTAGGTACTGGTACCAGGCCCTTGGGCTTC CTGCTCAAGAAAGACCTTGTGATGCAGAATTTCAAGTTTTCAACTACAGAATATGAGTCCACAAGCTTCAGGATTCAGAA TCTTGAACAAGAACTCATGACCTTGAAAAAAAGCCTTCAGCTGCAAAACATTGTGACAACAAAAGCAGAACCAAATTTGA TCAAAACACAGAAGATGATGGAGCCATCATGTGGGTTAGAAACTAGATCACTGAGCAAAAGGAGGAATAACACAATTGGA GAGGGTGCTAGTTGCATGAGTTCTGTGAATTTTGCTTCACAGAGAAAGTATGCTAGCCGGTTACTCAAGGTGTTTCGCCG CATTACTTTGTTTGGAAGTAGGAAACTGAAAAGAAAATCAGGAACTCCTAGCCAATTGTCCAAGTAAATGTAGCATAAGC ACTTCACTGTTAAAATGTATGAATATGGATACAGTAGTAACAACTGAGAGTTGGAAGATCAAGTCCTTTTCCTTTTTATT TTTCTTCCAAATTTCATTGAAAAATAGCGGAAAGAAAGAAAAGAAAGTTAAGAAAAAAGTAAGCGCATTTGATCTGAGAT AAATATTTTCTACACAAAACAATCATATTCGAG
CDS sequence (LotjaGi1g1v0008000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATATTGTGAGCCCAAAAGATTATTCTGTGTCTTCAAGTCCTTACTCTTCACCCAACATAGGGGTCCTGCTCAAAAT TAAGGTCATTACATGGAGTCAAGAGACTGGTTTTCCTGTGTCTGTCAGAGTTAGAGTTAAAGACAAATTGTTCAATCTCC ACAAGCTTCCTCTGACTTCAAAGAGTGGATACTTCAAGAAGAGGCTAAATGACACGTCTGAGATTGAACTGCCAGAAACT TTCCCTGGAGGACCAGAAGCCTTTGAGATGATTGCCTTGTTTGTTTATGGATCCTCCACATTGATTGACCCTTTCAATGT AGCAGCACTGAGGTGTGCAGCAGAGTTTCTTGAAATGACTGAAGAACACTGTTCTGGCAACCTTTGTGAAAGGTTTGACC TTTACCTGAACCAAGTTGTGTTGCAAAACTGGGATGACACACTCATTGCACTGCAAAGGTGCCAAATGCTGCTTCCTTGG TCTGAGGATCTTCTGATAGTGAGTCGCTGCATCGAATCTCTCGCATTCATGGCTTGCATGGAGATCCTTGATCCTGAGAG AATGAGAGACACAACACAAGTTGTTACATTGGAAGAACTAGCTTCCCAAGCTTGGAACTGTGAAATGATAAGCCAAGAGC TTTGGATTAAGGATCTGATTGCTCTGCCTTTTGGTTTTTTCAAAAGGGTCATAGGATCTTTGAGGAGACAAGGGATGAAA GAGAAGTATGTGAGCACAATCATTGTTTTCTATGCAAACAAGTGGGTGCTTTCTGAAAAGACACTCCAATTTTGTGAGAA GATCAATGGAGATGGCAACAAAGGTACTTCAGGATTTCTACAAGGTGTTGTTGATCTTCTTCCAAGAGGTGATAAGGGTA GGAAAGTGATTCCTGTTGGATTCTACTTTGCCTTGCTTTCAAGATCTCTTGAGTTTGGATTGAGAATTGAAAGTAAAGCA AAGCTGCAAGACCAGATTGCATCAATGTTGCACTTTGCTCAAGTGGAGGATTTTCTTCTTCCTGAAAGTGGTACAGTGTC AGTGTCCTCTAGCTTGGAGTTGGAAACCATGGAAAGCATAGTTTCAGCATATGTAGTATCCAACTCACACATGAACCACA CCCCAGAAGCTAGCAATTTCAGGGTTGCACAACTATGGGATGAGTATCTATCCAATGTGGCTGCAGATCCAAACATGGCA CCTCAGAGATTCATGGAACTCATTGAAAGGGTGCCACCATCTTATAGACAGAATCATTATCCACTCTATAGGGCAATCGA CAACTTTCTCAAGACACATCCAAGTATATCCCAAGATGACAAGGGAGCAGTGTGCAAATATCTTGACTGTCAAAGATTAT CACAAGAGGCATGCATTGAAGCTGTTCAAAACGAGTTGATGCCTCTAAGACTAATTGTCCAAGCCCTTTTTGTTCAACAA CTCAACACTCACAAAGTATTCAAAGAATGCTCAGATTCATTTAGATATGCACAATGTGGAGAGTTATCAGGAAGCATACC AAACTCTAGTCAGTGCCCATATTCTGCAAGCCAGAATCTAGTAGAAAGCCCATACACTGATGGGCCTGATCTAGGTACTG GTACCAGGCCCTTGGGCTTCCTGCTCAAGAAAGACCTTGTGATGCAGAATTTCAAGTTTTCAACTACAGAATATGAGTCC ACAAGCTTCAGGATTCAGAATCTTGAACAAGAACTCATGACCTTGAAAAAAAGCCTTCAGCTGCAAAACATTGTGACAAC AAAAGCAGAACCAAATTTGATCAAAACACAGAAGATGATGGAGCCATCATGTGGGTTAGAAACTAGATCACTGAGCAAAA GGAGGAATAACACAATTGGAGAGGGTGCTAGTTGCATGAGTTCTGTGAATTTTGCTTCACAGAGAAAGTATGCTAGCCGG TTACTCAAGGTGTTTCGCCGCATTACTTTGTTTGGAAGTAGGAAACTGAAAAGAAAATCAGGAACTCCTAGCCAATTGTC CAAGTAA
Protein sequence (LotjaGi1g1v0008000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDIVSPKDYSVSSSPYSSPNIGVLLKIKVITWSQETGFPVSVRVRVKDKLFNLHKLPLTSKSGYFKKRLNDTSEIELPET FPGGPEAFEMIALFVYGSSTLIDPFNVAALRCAAEFLEMTEEHCSGNLCERFDLYLNQVVLQNWDDTLIALQRCQMLLPW SEDLLIVSRCIESLAFMACMEILDPERMRDTTQVVTLEELASQAWNCEMISQELWIKDLIALPFGFFKRVIGSLRRQGMK EKYVSTIIVFYANKWVLSEKTLQFCEKINGDGNKGTSGFLQGVVDLLPRGDKGRKVIPVGFYFALLSRSLEFGLRIESKA KLQDQIASMLHFAQVEDFLLPESGTVSVSSSLELETMESIVSAYVVSNSHMNHTPEASNFRVAQLWDEYLSNVAADPNMA PQRFMELIERVPPSYRQNHYPLYRAIDNFLKTHPSISQDDKGAVCKYLDCQRLSQEACIEAVQNELMPLRLIVQALFVQQ LNTHKVFKECSDSFRYAQCGELSGSIPNSSQCPYSASQNLVESPYTDGPDLGTGTRPLGFLLKKDLVMQNFKFSTTEYES TSFRIQNLEQELMTLKKSLQLQNIVTTKAEPNLIKTQKMMEPSCGLETRSLSKRRNNTIGEGASCMSSVNFASQRKYASR LLKVFRRITLFGSRKLKRKSGTPSQLSK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 21 | 653 | 633 | 3.9E-273 | ||
| PANTHER | 21 | 653 | 633 | 3.9E-273 | – | |
| Gene3D | 30 | 133 | 104 | 7.1E-8 | – | |
| SUPERFAMILY | 32 | 127 | 96 | 1.57E-13 | ||
| CDD | 32 | 131 | 100 | 5.11347E-36 | – | |
| ProSiteProfiles | 40 | 104 | 65 | 11.833 | ||
| SMART | 40 | 128 | 89 | 2.2E-5 | ||
| Pfam | 40 | 130 | 91 | 5.1E-6 | ||
| ProSiteProfiles | 213 | 482 | 270 | 67.703 | ||
| Pfam | 214 | 458 | 245 | 2.5E-62 | ||
| Coils | 558 | 585 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0008000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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