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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0011000 |
| Transcript ID | LotjaGi1g1v0011000.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Importin subunit alpha; TAIR: AT1G51350.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q05AL1|ARMC8_DANRE Armadillo repeat-containing protein 8; TrEMBL-Plants: tr|G7K4V1|G7K4V1_MEDTR Armadillo/beta-catenin-like repeat protein; Found in the gene: LotjaGi1g1v0011000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:1362928..1369877) extracted from Lotus japonicus Gifu genome v1.2.
ATGCCGGCCACTCGCCCCGCCTCCGATCTCATCCTCGACCGCCTTCTCTCCATTTCCTCCTCCGATTGCCAAGTCAAGCT CAAGGCCATCCGAGAGATCAAGAACCAGATCATCGGCAACCGCACCAAGAAGCTCTCCTACATCAAGCTCGGCGCCGTCC CCGCCGTCGCCGCAGCTCTTACCGGAGCCGATGCCAGTTCCGATTGCGGCTCCAGCCTCATCGTTCAGTCCGCCGCCGCG CTCGGCAGCTTCGCATGCGGCGTCGACGCCGGCGTCCGCGCCGTCCTTGACGCCGGTGTGTTCCCTCACCTGATCAGGCT CCTCTCTGCCGCTGATGAGAAGGTCAGTCGGTTCTGTTAATTACAACGTTCTTTGATTTTGCTACCATGAATTAGCGGTT AAGAGGAAATTGCAATGCAGATTGTTAGGTTAAGATGAAATGTAGATGATTTGATCCAATGTTTATATTGTTTATTGCTT ATGATGATATATTGGGAAATTGGAATGTTAATGTTAATGTGTTTATCTCAAAATCAGCTATCTATTGATTCAAATTTTGA TTTCAGGTTGTGGATGCAGCTGCGCGCTCTTTACGAATGATTTATCAATCGAAACTCGCGCCGAAGTTTGATTTTTTTCA TGAGGCAAACATGGAGTTTCTTCTTTCGCTATTTAAGAGTGAGAATGAGAATCTTGCCGGGCTAGGTGCGAGCATTATTA TTCATTCCTGCGAGACAAGTGACGAACAAAATGTAGTATGTTCTGCTGGTGCTTTAGAGAAACTTATGGGCCTTCTTGAT GGTTCTATAACCCAGAGAGATGCTAGTTTAGAGTCCCTAGCTACTATTCTTAAGAACAATCTAGGAGCCGTCTCGAAATT TGTTGAGCTTCAAAATGGAAGAGCTTTGAGTTCTGTAATTGAATTGACGAAGGACAGATGTCCGAGGACAAGGTTACTAG CTTGCTTGTGCTTGATTTGTGTAAAGAATTCTTCATCTTGCTATCTTCAAGATATAGGAATCAAGGCCAAACTGATTCAT ATTTTGCTTGAGCTCCTTGATGATTCTGGTCAAGTTGGAGACGAGGCTTCCTTTGCTTTTTCGAGTTTACTTGCGGAAAA GGAAGATTTGCATAAGTTAGCATTTGAGGCAAATGCTATCGACAAGCTCTACAATCACTTACAAAATTGTGCTTTGCATC CCAAACGTCTTGAAGGGATATTTCTAGCATTAGCTAATCTTTGCTCAAAATTGGAATGCTGCAGGTCTAAGTTTCTTTCA TTGCAGGTCTGTTGTTTTGTGCGAATATACATTTTTCAGTCCCCTCCCCCATAAATATTATTGTATTCTTTGCTGCAAAA TTAACTGATGAAAATCGAAAAGAATACCTGCCAAGGTAGTCAAAATCGAGGTTTATATCTAAAGTGGAGAGGGGTCGTGA ATCGTAAATTGCTAAATTGTAAGATTTAGTAAATTTTGCTATTCATATACGTATTTAAATTCTTATGTGCACATAAAACA GCATAAATAACCAAAACTCTTAGGAATGTCATATATAAATCATAAAGTGTCATAAAACGTAACTCGTAATTCATAGGAGT GTCATACATAAGTCATAAACTACTAATCCAAACACCATAAAACTTAGGAAGCATGAAACTATCAAGCCATAAAACTTAAA CATCCAACTTAAGCTAGGAAATGGTTTAGCATGGTTTAAGATTTAGTGAGCACTCAAAGCGGCCAGGGGTCCAGAATCGC TAAATCGTTCACATTAATGCTTCATAGCGCGATTTTGACTACCTTGATACCGGCAGTTAGACACTTCTATAATCGTAGAG ATGTCAATATTATGACTACACGAGGCAAGATGGGATATGAATATGATCAATAGAGAGAAAGTTGAGGTAGCTCAAATTGT AGAAAAGATGGTAGACTATTTTCTTCGGTGGGTTTGCGATGTGTTGAGAAGATATGGAGAAGAGCTAGTAAGGAGGGTTG ACCAAATGGGAAACAGTCCGTTAGTTAGCGGTAGAGTGAGACCAAGAGAAACTATAGGTCAAATCATTTAGAGATGTTAG GTAATACAGTATTGTGATTTTTTTGATAAGCCAAAATGTATTCTATCATACGCACAAAGGGTGCTTAAAATCCATATACA TGAGAGAGTTACAAAAGACTAAATTAGCATACACAAACAAAGAAACCTTTGACATAACCACTACTAAGTCATAAACCTCT AACAACTGCTTTGACACAGATTAAGTTTAGGCCTCCCTTCTGCTATTTTAGCTGTTCTAAAGTAGGCTTAAATATGTTTT TAGTCCCTACATTTCAAAACGTGCTGATTCGATCCCCAGCTTTCTAACATAGGTGATTTTAGTCCTTGCCGTCGGTCTTC GTTACAAAAAAGGTGACGAGGCTGACATAGCTTGTTTTCTCTCTCCTAGTGGAATTACACGAAATATAAATAAAATAAAA CATTGCCACATCACTTAATTCATTCATTTAAACCCTAATTCCCAAATTTTCCCCCAATTTCTCCCCTTTCATACGAGAAC CCTAGCTCCTGATTTCACTATTCCCTTCTCTCATCAACATCATTTGCAGCAATCTTCTTCCAATTCTTCACCCTTTGCTT CAGTCCCTACTCTGATTTAACTGCAACAGCATGAAGGAGGCTGCTCGATCTTTCGAACAGAAGAGAATGATGTATGTGAG AACTTCATCTTCATCCTATGCGCCATCGTCGAAGGCGCGCGGCTGTACCGAGTGAGTTCTACCTCCTATACCCCACTCAC TCTTTGATTGGAAAAAATGTGAACACTAAAGAGGAAATCCATGGTCCCCACCCCCATTATTCAATATAATCACGCACACT ATTATAAACCCTTACAAATCAATGGTCCCCATACCCATAGCCATTTGCACATAGTTTAACCATTTAAAGGAAAGGTTTTT ACTTACTTGCTCTTCTCGAACAGCAAACACAGTGAAGCAACACAGAAGCACCAACGAACCACCGAGGCACCGCCGTCACA CCCTCGTCGTTGACACCTCAACGACCACGATCAAGCACCAATCAGACAGATGATGAAGAAAACGAAGGGAAAGTCGAACA GAACTCTCGGGTTTTCTTTCTTCTCTGAATGTTTACGGAGGGTTAAGCTCAAAGAAGGTAAATGTGGAAAAAATGGGAAT TAGGGTTAAATGAATGAATTAAGTGGTGTGGAAATGTTTTATTTTTAATTATATTTCTTGTAATTCCACTAGGAGAGAGA AAACAAGCTCCGTCAGCGTCGTCCCCTTTTTTTTTTGTAACGAAGACTGACAGCAGGAACTAAAACCACCTATTCTAGAA CGTTTAGGATCGAATCAGCACGTTTAGAAATGTAGGGGCTAATGCCAAAGGACCCCTATTTTGTAGGGACCAAAAACATG TTTAAGCCTTCTAAAGTATTATGATGTATTGTCGTCTTGTGATTCATGGAGCCAACCCCATTTAATGAGAAAAGACTTGG TTGTTGTTGACTTGTCGTATTGATCAAATTGTTCTTTTCATGATATAATATTTTATCATGCCACCATGAACATATTTGAA TTAATCCAATGTGTTCCTTTAAGATACACAATAATCAGTTTTGTGTTTCTTTTCAGTTTTTGCACCAGTAACCTATACAT GTGGATACTAAGTCTGCTTGCAATTCCTTCTACTCTTTTTTATGAACACAGGTGTTGAATCTTTTAATTGATGCCTTAAC CCATGATGAGGCCAATGTACGTGCCGCAGCTTGCATTTGCTTAAGAAGTGTGTCTCGCTCAGTCAAGGTCTGCAACTTGC AACTAATGGCACTTGAAGTCTTTTATGCTATGTATAACTTAGTTCTTATAAATTTGCATTCAGAATTTAAGTGCAGGTTG TTTTATGAATGAAAAGATTGTAATTCCATTGTTTCGGCTTCTCTCTGATCATTCTACTTCTGTCCAGGTATGTCTTATTT TATTTTTGCATTTAATTAACTCAATTAGTTGCTAGGTTTCTTTCATCAAAAAATGCTTAAAAGAATCTGTCAATCACACT GAAGAGTTAGAAATTAATTTCAGAGTCGGAGGTTGAAAAAGTCAATTTAATATGTGCCTCTTACATATATAATTTTATGT TACTATTGTTCATGCTAGTCTCATGATTATTTATATGCTATTTTCTTGCCTGTTAATGTATATCAAACTTGAAATTGAAA TAACTCAGAGATTAGGTTTTTTGCTTGTCTGGTTGATTAATTAAGATGGTCTATAGTTTATCTGCCTAATGATTGGGAAG TTTAACAGATAGTTTTTCGTTATGATTTGAAAGATATATTCAATTAGGACTCGTGTAATTTCTGTAGTATCTGTGTTCAT TTTGTGTTTGTGCCACCTATCTTAATAGTTTCCAAGTTTTATTTTTGAATTTATCATAATTTATCCACTGTTTGGTGCTG GTTTTATAGACCATCGTCTATTCAAGGCCATACATGCTGGTGTTAAGTATTTTTAACAATCCCCTCTTTAACATAGTTGA ATAGTTCAGTTCTAAGGGTTTAAAACTTAGCCTTGAATTTGGAAGTATGGGATGGAAGATATATTGGATTTGATGCAGAG TAGGGGGGAGCTTATTTAAAGTGCTAATTTTTGGATTTAAACTGTTGCAAAATACGACATTCAGAATACAGGATTCAAAA GAGGGATTTTGATTTGCTGGACACTTTTTCTTTAATAATATTTGAACCGTGTTGTCAAATAGATAAAAAAAATGTATTAC AATAAAATCTGATATTGTAAAACAAACTCAATCTGCTGAGCACTAGGAGTATTATGTCGCATTAGATATATCGTATCTTG TTCAAATGAGGTTATAACAAAGGACATTTATGCCTATTTATTAATTATACCTAGAAGCTTACCTTTTATTAGATCCAACA TGACCTCTGCTCTGCAACACTTCGATTTTCCCTCAAAGTTATACTTCCTTGATTACTCATATTTAAAGTGATTTTCATTT TCCCTCATTAGCTCTATTAAAACTTAGTAAGGACAACTTTTTCTGTGTTTTCTTCCAGGTTGCGGCCCTTGGTGCTATTA GCAACATAGTGGTTGACTTTAAACCCCATAAGTCAACATTCATACAATGCGGAGGCATTAAAGAGCTTGTCCAATTCACA AAGTCTATGGATTCGTCTTTGAGATTGAATGCTGTATGGGTCCTAAGGAACATGGTATTTCTTGCAGATAAGAGTTGTAA GGAAGGAATTTTTATGGAGTTGACAGTGTCTACATTAGCTAGCCTCATCTGTGGTAATGATCTTCGTTGTCAGTTCATTT TTTTTTTCTTCTGATTAATTGGTCCCTGGCAAAGAAAGTCATCATTGGTTCTGTATACCCTGCAGATCCTGAGCCTTCTG TTCAAGAGCAAGCTCTAGCCCTTGTTCGCAATTTTATTGATGGAAGTATTGATTGTATTGAATATGCTTTTGCTGGAGAT GGTATCATACTGGATGCTGTTGGAAGGCAATTGCAAAAATCCTCAAAAGTTGAAATTGGGATACAGGTGGGAAATAAATT TTGAACTAATTAGTCATTTGTGGAAATCAGACATTACTATTGGCACTGCTATAAATGTTATTTAGTAATAGTAAATATGG AAATGTTAGGATATTTTATGATTCTTATATTCTTCCTTTTTTGTACTACCTCTTTCTTTCCTTTTTGGGGTTAAATCATG CATAGGAGCTGCAAGCTCTTGGGTTGGGGAGGAGGGGCAGGTGGGATGATGGAGGATGGGACCTCTTACATCAGAATCAC ACCCAAGTCTAAAGACTTGGGCAAGTGCCAATTGAGCTACAGCCTTGTTGGCACTTCTTTCCACCATTTATTAATAGCTT TTTATCTAAAAAAATTTGTGGTTTTTTCTCTTGATTTTAGGCTAGTATTCTGTCGGAGCATGGTTAGTGTCTTATTAGTT GCTTATTGGATGATGAATGTGCATCTCATAGTGTATAAAATAATAAAATAATTAATATTAATTTTTTATTGCAATTGTAA ATATTGTTTACTTTTGTATAGAATGTTTACAGGCGAACAAGACACCCACTTTAATCAATTTCCCTTACTTGTATGGTTCA ACAACAATGTATATAGCACCTTGGGAATGTGGTGCTGTTTATTTATTTATTTATTTATTATTAATGTTATTATTTTCTGG TATATCAACAGAGAAATTCAGCAAATTTTTGAAATTGTGTTATTCACTAGTCAAGTATGCTTACTGATCCTTTCATGTAG CAGGACAATCTGTTTTAATGATATATCTAGCTAGCCATTACTTTATTTTGATATAATTTTTTTTAGTTATTGTAAAATAC TACAAATTAAAACTATTGTTACAGTCTGTTATTTTGAAACTGTCCCATACAAATATTTCAACATTTCTCAGTAGGAGGTA TAAAAGGTTAACAGAGTTTTTATTCAAGCTGATTAATGATGCCTTTGTTTTTATTTTCTGTGTAGGGAATGTACACACTA AGCAATATTGCAAGTGGAAATGAGTTTCATAAAGAAGCCATAATGCAGCTACTCTTTCCACAAGCAGAAGATGGGTCAAA CTCTTTCTTGAGCCAGTTTTTGCAGAGTAATGACAATGATTTACGCGCATCTGCTCTCTGGGTCATAGTAAATCTGACAT TTCCTTCAAGTCGCGGTGCATTTAGTCGGATTGTAAAACTGCGTAATCTTGGCATTGTTTCTCAAGTCAAGAGGATGGTC AATGATTCTTGCATGGATGTGAAGGTCCTTTAATCTTCATTGTAAATTGGTTTTTGTTATATGCTTCTTTTAGTCATTTT GTATATTTTTCTTATGCAGCTTCGGGCAAGACTTGCACTTGGGCACATTATTACTTTTGGTGATAGTTAA
CDS sequence (LotjaGi1g1v0011000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCGGCCACTCGCCCCGCCTCCGATCTCATCCTCGACCGCCTTCTCTCCATTTCCTCCTCCGATTGCCAAGTCAAGCT CAAGGCCATCCGAGAGATCAAGAACCAGATCATCGGCAACCGCACCAAGAAGCTCTCCTACATCAAGCTCGGCGCCGTCC CCGCCGTCGCCGCAGCTCTTACCGGAGCCGATGCCAGTTCCGATTGCGGCTCCAGCCTCATCGTTCAGTCCGCCGCCGCG CTCGGCAGCTTCGCATGCGGCGTCGACGCCGGCGTCCGCGCCGTCCTTGACGCCGGTGTGTTCCCTCACCTGATCAGGCT CCTCTCTGCCGCTGATGAGAAGGTTGTGGATGCAGCTGCGCGCTCTTTACGAATGATTTATCAATCGAAACTCGCGCCGA AGTTTGATTTTTTTCATGAGGCAAACATGGAGTTTCTTCTTTCGCTATTTAAGAGTGAGAATGAGAATCTTGCCGGGCTA GGTGCGAGCATTATTATTCATTCCTGCGAGACAAGTGACGAACAAAATGTAGTATGTTCTGCTGGTGCTTTAGAGAAACT TATGGGCCTTCTTGATGGTTCTATAACCCAGAGAGATGCTAGTTTAGAGTCCCTAGCTACTATTCTTAAGAACAATCTAG GAGCCGTCTCGAAATTTGTTGAGCTTCAAAATGGAAGAGCTTTGAGTTCTGTAATTGAATTGACGAAGGACAGATGTCCG AGGACAAGGTTACTAGCTTGCTTGTGCTTGATTTGTGTAAAGAATTCTTCATCTTGCTATCTTCAAGATATAGGAATCAA GGCCAAACTGATTCATATTTTGCTTGAGCTCCTTGATGATTCTGGTCAAGTTGGAGACGAGGCTTCCTTTGCTTTTTCGA GTTTACTTGCGGAAAAGGAAGATTTGCATAAGTTAGCATTTGAGGCAAATGCTATCGACAAGCTCTACAATCACTTACAA AATTGTGCTTTGCATCCCAAACGTCTTGAAGGGATATTTCTAGCATTAGCTAATCTTTGCTCAAAATTGGAATGCTGCAG GTCTAAGTTTCTTTCATTGCAGGTGTTGAATCTTTTAATTGATGCCTTAACCCATGATGAGGCCAATGTACGTGCCGCAG CTTGCATTTGCTTAAGAAGTGTGTCTCGCTCAGTCAAGAATTTAAGTGCAGGTTGTTTTATGAATGAAAAGATTGTAATT CCATTGTTTCGGCTTCTCTCTGATCATTCTACTTCTGTCCAGGTTGCGGCCCTTGGTGCTATTAGCAACATAGTGGTTGA CTTTAAACCCCATAAGTCAACATTCATACAATGCGGAGGCATTAAAGAGCTTGTCCAATTCACAAAGTCTATGGATTCGT CTTTGAGATTGAATGCTGTATGGGTCCTAAGGAACATGGTATTTCTTGCAGATAAGAGTTGTAAGGAAGGAATTTTTATG GAGTTGACAGTGTCTACATTAGCTAGCCTCATCTGTGATCCTGAGCCTTCTGTTCAAGAGCAAGCTCTAGCCCTTGTTCG CAATTTTATTGATGGAAGTATTGATTGTATTGAATATGCTTTTGCTGGAGATGGTATCATACTGGATGCTGTTGGAAGGC AATTGCAAAAATCCTCAAAAGTTGAAATTGGGATACAGGGAATGTACACACTAAGCAATATTGCAAGTGGAAATGAGTTT CATAAAGAAGCCATAATGCAGCTACTCTTTCCACAAGCAGAAGATGGGTCAAACTCTTTCTTGAGCCAGTTTTTGCAGAG TAATGACAATGATTTACGCGCATCTGCTCTCTGGGTCATAGTAAATCTGACATTTCCTTCAAGTCGCGGTGCATTTAGTC GGATTGTAAAACTGCGTAATCTTGGCATTGTTTCTCAAGTCAAGAGGATGGTCAATGATTCTTGCATGGATGTGAAGCTT CGGGCAAGACTTGCACTTGGGCACATTATTACTTTTGGTGATAGTTAA
Protein sequence (LotjaGi1g1v0011000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPATRPASDLILDRLLSISSSDCQVKLKAIREIKNQIIGNRTKKLSYIKLGAVPAVAAALTGADASSDCGSSLIVQSAAA LGSFACGVDAGVRAVLDAGVFPHLIRLLSAADEKVVDAAARSLRMIYQSKLAPKFDFFHEANMEFLLSLFKSENENLAGL GASIIIHSCETSDEQNVVCSAGALEKLMGLLDGSITQRDASLESLATILKNNLGAVSKFVELQNGRALSSVIELTKDRCP RTRLLACLCLICVKNSSSCYLQDIGIKAKLIHILLELLDDSGQVGDEASFAFSSLLAEKEDLHKLAFEANAIDKLYNHLQ NCALHPKRLEGIFLALANLCSKLECCRSKFLSLQVLNLLIDALTHDEANVRAAACICLRSVSRSVKNLSAGCFMNEKIVI PLFRLLSDHSTSVQVAALGAISNIVVDFKPHKSTFIQCGGIKELVQFTKSMDSSLRLNAVWVLRNMVFLADKSCKEGIFM ELTVSTLASLICDPEPSVQEQALALVRNFIDGSIDCIEYAFAGDGIILDAVGRQLQKSSKVEIGIQGMYTLSNIASGNEF HKEAIMQLLFPQAEDGSNSFLSQFLQSNDNDLRASALWVIVNLTFPSSRGAFSRIVKLRNLGIVSQVKRMVNDSCMDVKL RARLALGHIITFGDS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 9 | 281 | 273 | 2.4E-25 | ||
| PANTHER | 14 | 649 | 636 | 8.7E-234 | ||
| SUPERFAMILY | 17 | 652 | 636 | 4.01E-40 | ||
| SMART | 87 | 128 | 42 | 8.9 | ||
| Pfam | 92 | 124 | 33 | 1.2E-4 | ||
| ProSiteProfiles | 99 | 126 | 28 | 8.522 | ||
| SMART | 171 | 210 | 40 | 340.0 | ||
| Gene3D | 282 | 651 | 370 | 1.4E-54 | ||
| SMART | 299 | 341 | 43 | 190.0 | ||
| SMART | 386 | 426 | 41 | 8.8 | ||
| SMART | 428 | 468 | 41 | 2.8E-4 | ||
| Pfam | 431 | 467 | 37 | 5.4E-7 | ||
| SMART | 471 | 511 | 41 | 180.0 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0011000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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