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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0011800 |
| Transcript ID | LotjaGi1g1v0011800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain-containing protein; TAIR: AT1G55760.1 BTB/POZ domain-containing protein; Swiss-Prot: sp|Q680K8|Y1576_ARATH BTB/POZ domain-containing protein At1g55760; TrEMBL-Plants: tr|A0A151U2K6|A0A151U2K6_CAJCA Protein maternal effect lethal 26; Found in the gene: LotjaGi1g1v0011800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:1458941..1461500) extracted from Lotus japonicus Gifu genome v1.2.
CATGACACCATCCCTAAATAAAATGATGTGTATATATACATAACAGAGTGATGAGTGGTGTGTTTCGCACATAAATCTTT TAATGTATTTTATAGTAATTTTAACACTATATTACTATATAAGTAATAATATGTGAATATATAGTTTTTAGCATACATCT AACTACATACATATTTCAGACGGTTTTTAACTCCTGCAAACATTAATTGGGATTAAAATTGGTGCATCATCAAAAGATGC ATATGAAAAGCTTAAGTGTGCATATATATCCGTATCTTAGCTTTAAAGCTTGCAAATGACTTAAATTTACTTTGGTAATA TCCTTGCATATTTGATGATTATTTAATAGATCTAGTTGAGTCACTTGAATTAAAGGGTAGGTGAGACTAAGAGAGAGAGA GAGAAAAAAACAGAGTCAAGAACAGAGAGCATGTTCATGTGAAGAGCAAAAACCATATACCAAGAAGAACTGAAAGGTGA GAAAGCTCAGAGAATTTGTTCTTGTTGGATTGCATCCATGAAATTGAAACCACTCTGCAACACTTAAACTTTTGCTGAGA GGATGATGAACAACGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCATATAAGGTGGAAACAACATGTCGTCTAGCA CAATGGAGAGTCCACAACTTTGCCTCCAATACTTACCGCAAATCCGATCCTTTCAAGATAGCCATGTGGAACTGGTAAGT AACTCGATCTCTTTCTATCTCTTCCACCAAAACCAAATAACAGTTCATGCTTTTTCCTAAAACACAAACACATGATGCAG GGGAGGGAGGGTGAGCTTTCACTGAAAAATCTTGTTAAAAATCACAAAAAGAAGTGGGGTATCCCTTAATCATTGAGAAA TGTTTGATAATTTAATGGGGGCAAAGAAAATTTAGAACTTCAGATTGTTTTTCTCTAGTTTGAAGACATTTTATTTTGTA GTTGTTGTTACTAAGTTTATATTTTTGTTCTGAAATGAAGGCATTTATCAGTGGAGAATAACCGGGTTTCCTATGTTAAA TTGTACCCGGAATTGTCCAAAGATAATCCTCTGGTTGCATCTTTCATCGTTCGGGTTCTTAGCTCTGTTGGAAATAGCAA GGCCTTGGTACATTCAGGTGATTAAAGTTTTGTGCATTTAACTTGTTGATACCATATAATTAAATAGAAGATTTGATTGA ATATGATTCTAATTTGATTAATTTCCACTTAGTATGAAGTTTTTAACAATGGAAAACAGAAGATAGCTAAAGTGTTTATG GAATTCTTTCTTGCATCATCAGAATTCCTCCTTAATCTGCTGTTTATAAAGTTCAGTATTTTGAAATTTTAATCATTCAA TTATCTGATTTCCTTGTATTTTCTTCAATATGATCAATGCAGAAATAAAAGACAAGCTTCTTAGCAATAGCGAAGGCTAT GTTTGGATGATTGAGGTTCCACTGCCAAAAAAATTCATTATTGACATTGAGTTCCAGGATTTGAAGACTACATGCCCAAA GGTACCATTTTAGTTTTGCTGCCTTTTTGGCATTTGCTACATGAGGGTACTTAATGATATATGTAATCATAGTCACCATC ACTATTAATCATTTTATTAAAACTTGAAGGAAAATCACTGATATCTTTAAGCACAATCATAGTATTGATATATATATACT TTCATTTGAATACAGGATGGAGCACTTTGCTCGATCTGGCCTAGATTCTTGCAGCAAAGATCGAACACAACAGCCAACGA GTGTCTCGGTCGAATGCTAACAGAAAACATCCACACAGACATCACAATCTATGCCAATTCATTTCAAGAAAGAATAAGAG CCCACAGAGCTGTCCTTGCTGCAAGGTCACCTGTCTTCCATGGCATGTTCTCACACAACCTTAAGGAGAGTGATCTTTCC ATCATAAACATATCAGACATGTCATTTGCAGATTGCAATGCACTTGTAAATTATCTTTATGGAACCATCAAAGATTGTGA GTTTCTGACTCACAGGCTTGCACTACTCCGCGCAGCGGACAAGTATGACATAAGTGACTTGAGAGAGGCATGTCATGAGA GTCTTATGGAAGATATTGATGCTTCCAATGTGCTTGAAAGGCTCCAATTTGCATCTCTATATCAATTGCAAAATCTGAAG AATAGCTGCATGCAATACCTTGTGAAATTTGGTAAAATATTTGACATTCATGATGATTTCAAAGCCTTCTTGCAAAGTGC AGACAGAGATCTGATTTCTGAAGTCTTCCATGAAGTTCTGAATGAGTTGAAAGGATTGTGAAAATCTTCTAATTTCAAAT TAGGACAGGAAGGAAAGATAGTATTTGAACATATGCTCAAAAGTAAGCTGTTTAGTTTCAGGGTTATGCAGGATTTGTTT TGATGAATTTTCTATTTATTTCTTAGATGGATTTTTTCTTGATTTCAATGTACATATGTATGTAGCACTATTGATTTCAG GCTATTCTAATTCTTATTTCTTGATTTCAATGAACATACACATCATATATAAATACTAAATTCTATTCAAAGTTTGTTCA
CDS sequence (LotjaGi1g1v0011800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGAACAACGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCATATAAGGTGGAAACAACATGTCGTCTAGCACA ATGGAGAGTCCACAACTTTGCCTCCAATACTTACCGCAAATCCGATCCTTTCAAGATAGCCATGTGGAACTGGCATTTAT CAGTGGAGAATAACCGGGTTTCCTATGTTAAATTGTACCCGGAATTGTCCAAAGATAATCCTCTGGTTGCATCTTTCATC GTTCGGGTTCTTAGCTCTGTTGGAAATAGCAAGGCCTTGGTACATTCAGAAATAAAAGACAAGCTTCTTAGCAATAGCGA AGGCTATGTTTGGATGATTGAGGTTCCACTGCCAAAAAAATTCATTATTGACATTGAGTTCCAGGATTTGAAGACTACAT GCCCAAAGGATGGAGCACTTTGCTCGATCTGGCCTAGATTCTTGCAGCAAAGATCGAACACAACAGCCAACGAGTGTCTC GGTCGAATGCTAACAGAAAACATCCACACAGACATCACAATCTATGCCAATTCATTTCAAGAAAGAATAAGAGCCCACAG AGCTGTCCTTGCTGCAAGGTCACCTGTCTTCCATGGCATGTTCTCACACAACCTTAAGGAGAGTGATCTTTCCATCATAA ACATATCAGACATGTCATTTGCAGATTGCAATGCACTTGTAAATTATCTTTATGGAACCATCAAAGATTGTGAGTTTCTG ACTCACAGGCTTGCACTACTCCGCGCAGCGGACAAGTATGACATAAGTGACTTGAGAGAGGCATGTCATGAGAGTCTTAT GGAAGATATTGATGCTTCCAATGTGCTTGAAAGGCTCCAATTTGCATCTCTATATCAATTGCAAAATCTGAAGAATAGCT GCATGCAATACCTTGTGAAATTTGGTAAAATATTTGACATTCATGATGATTTCAAAGCCTTCTTGCAAAGTGCAGACAGA GATCTGATTTCTGAAGTCTTCCATGAAGTTCTGAATGAGTTGAAAGGATTGTGA
Protein sequence (LotjaGi1g1v0011800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMNNDSSSSSSSSSSAYKVETTCRLAQWRVHNFASNTYRKSDPFKIAMWNWHLSVENNRVSYVKLYPELSKDNPLVASFI VRVLSSVGNSKALVHSEIKDKLLSNSEGYVWMIEVPLPKKFIIDIEFQDLKTTCPKDGALCSIWPRFLQQRSNTTANECL GRMLTENIHTDITIYANSFQERIRAHRAVLAARSPVFHGMFSHNLKESDLSIINISDMSFADCNALVNYLYGTIKDCEFL THRLALLRAADKYDISDLREACHESLMEDIDASNVLERLQFASLYQLQNLKNSCMQYLVKFGKIFDIHDDFKAFLQSADR DLISEVFHEVLNELKGL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 13 | 336 | 324 | 1.9E-148 | – | |
| PANTHER | 13 | 336 | 324 | 1.9E-148 | – | |
| Gene3D | 147 | 300 | 154 | 1.3E-35 | – | |
| SUPERFAMILY | 155 | 268 | 114 | 3.26E-24 | ||
| Pfam | 164 | 268 | 105 | 3.9E-22 | ||
| CDD | 169 | 253 | 85 | 2.39465E-19 | – | |
| ProSiteProfiles | 170 | 231 | 62 | 16.363 | ||
| SMART | 170 | 270 | 101 | 2.8E-19 | ||
| CDD | 271 | 331 | 61 | 0.00110757 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0011800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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