Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0012200 |
| Transcript ID | LotjaGi1g1v0012200.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT1G67000.1 Protein kinase superfamily protein; Swiss-Prot: sp|P93604|LRK10_WHEAT Rust resistance kinase Lr10; TrEMBL-Plants: tr|A0A072VFM0|A0A072VFM0_MEDTR Receptor-like kinase; Found in the gene: LotjaGi1g1v0012200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:1530159..1532847) extracted from Lotus japonicus Gifu genome v1.2.
GAGAAGGAGGACACGTTGTCTTTTTAGCTGTTGCAGTTTCTTGATGCAGCTGCAGGAGTAGCAGCACAAGTATAATTTGG AGGAGGAAGCATGAGGGTGAGGAGAAGAAGGATTTCAATTTCATGATTTATTGTTAATTTCACTTCAAGTTCTAGTTCTA GCGGGGATCGATAGAACAAACATGTTTCATTCATTCATTCATATACTGATATACTCAGCTTTCTAAGGACATACTCAATT GATTGTCTTTCTCTAAGTCAAAGTCTTTCTTTCAGCCAGCCAGCCCTATCAAATCATGATGGACTTGGAAGTCTTTGTGT GCCACTTACGCGCATTCTTCCATTAATTGGTTTGTGGTTTGCATTATCACATTCAGATTTCTTCAATGTTGCATTTTTCT CTCAATCAAAATCATGACATTATTACATTGACTTGGAAGTCTTGTGTGGGACTGTACTGGGACGACTTACGCGCATGGGT TTGTTTGAATTTTCACATTCCACACAATTTCTTCTTTACCTTATTTCTTCAAGAAAAACAATTACTCTATGCTATAGTTA GAGAGGTTAACAGATCAGACATGAAAACTAGCATGATGTCAATGCTAGCGCTGCTAATAATTCTGCAGCTGCTCTTCATG ACTAGTGTTGGAAATGCTCACAATAATCAATCCTGTCCCTTCCATCTATCTTATGCAGATAACAGCAATGATCAGCAGAT GATGATTGAATTTCCAGCACTTCCAGTTCCAGTGAGACTCCTCGTCAACTACATAGACTGCGAAAGACGAGAAATACTTC TATCTGATCCCGACCACTGTCTTCCTAGACTCTTTCTAAGACACAACTTCTCATTGTTTTACCCTTTAAGACCCTCCTCG TCGCAGTCAAGCTACAATACTAGTTTCTTCGATTGTTCTTCAGTTGGACAACACCATCTGAGAAGCTGGGTTCAAAATTC CTCCAATGCCCAAGATATGCTGTCTTGCCCAATTTATGTCGCTGACCCCGGAGAAAGTGTCGTTGATTTGGACCTTTTTC AGTGCACCAAAATGTTTGATCAAGTTTTGCCATTATTTTCAGATGATGTACGGCAGAACTCACTCCAATTGGAATGGCCG GAAACAAATTTTGATAGAGGGTGCTTAAGATGTGAACACAAATTAAAGAACAAATCAAAGAGGAGGATGAAGATGAGTGA GCACAAATCAAAGCACAAAATTCATCAATCCGCAATTTTTATCGCTGCAGGTAATTTGATCAAACAAAATCTTCTGTCTC ATCCTATTTATTTGACCAATTGAATTATATGATTCCATTAAGAAAACGATATGAGTGAGTCCATTACAAACATTCATGTG TCTTTTTAACTGATATAACAAAACAGAAAAATGATACACCATTTGGGGCACATAAAAGCTTATTCCTCTTTGCTCACGTT TGTTTGATCCATTTTGTTTTCATTTGAACATGCTTTTGTTTCAAGTTTATATTTTTGAAATTTGCAGGTGTAGTTATTGG TTTACCTTTCCTGGTGTTTTTGCTCAGTGTCACCTTTCGAATATATCGCAATTATAGGATGAAAGGGGAGGATCATGCAA GAGTTGAGAAATTTTTGAAGGATTACAGGGCTCTGAAGCCAACCAGATTCTCTTATGCTGATATCAAGAGAATCACAAAC AAACTCAAAGAGAAGCTAGGTGAAGGAGCTCATGGAGCAGTCTACAAAGGTAAATTATCCACACAAATTCTGGTTGCTGT GAAGATCCTCAACAACTCAGAGGGAGATGATGGGACAAAGTTCATCAATGAGGTGGGAACCATGGGCAAAATACACCATG TCAATGTCGTTCGCTTGCTTGGCTATTGTGCTGATGGGTTTCATAGAGCTCTAGTTTATGACTATTTCCCAAACGGGTCA CTACAGAATTTCATCGTCTCTTCACCCAACAACAAGGATAAGAAAACCTTCCTTGGATGGGAAAAGTTGCAAGAGATTGC TCTTGGCATAGCCAAAGGAATTGATTATCTTCACCAAGGTTGTGATCAGAGGATTCTTCACTTTGACATCAATCCTCATA ACGTCTTGCTTGATGACACCTTCACTCCAAAGATTACTGACTTTGGTTTGGCTAAGCTGTGTTCCAAGAATCGAAGCACG GTGTCCATGACTGCAGCCAGAGGAACACTAGGCTACATGGCACCTGAAGTTTTTTCTAGAAACTTCGGCAATGTGTCTTA CAAGTCTGATATCTACAGTTATGGGATGCTATTGCTAGAGATGGTTGGAGGGAGAAAGAATATTGTAAACAACACTACAG GTCAAGAAAATAATAATGTTCAAGTTCTGTATCCAGATTGGATACATGGTTTGGTTGAAGGAAGAGACATGCATGTCCGT ATTGATGATGATGAAGAGGGAGATTTTGAAATTGCAAAGAAACTAGCTATTGTGGGACTTTGGTGCATTCAGTGGCATCC TATGCATCGTCCATCCATGAAGACTGTGATGCAGATGCTCCATGGAGAGGGAGACAAGTTAAAAGTTCCCACCAACCCTT TCCAGCCAAAAACTTCAGCTAGTACAAGCAGTACTAGTGGTACTATTGTTGCAAAACGTCTGAATTTGGAGCTGGAAGTG ATTCAAGAGTTAGATTAGCTTAACTATAGATTTCTATTAATTAGTTGGT
CDS sequence (LotjaGi1g1v0012200.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAGGGGAGGATCATGCAAGAGTTGAGAAATTTTTGAAGGATTACAGGGCTCTGAAGCCAACCAGATTCTCTTATGC TGATATCAAGAGAATCACAAACAAACTCAAAGAGAAGCTAGGTGAAGGAGCTCATGGAGCAGTCTACAAAGGTAAATTAT CCACACAAATTCTGGTTGCTGTGAAGATCCTCAACAACTCAGAGGGAGATGATGGGACAAAGTTCATCAATGAGGTGGGA ACCATGGGCAAAATACACCATGTCAATGTCGTTCGCTTGCTTGGCTATTGTGCTGATGGGTTTCATAGAGCTCTAGTTTA TGACTATTTCCCAAACGGGTCACTACAGAATTTCATCGTCTCTTCACCCAACAACAAGGATAAGAAAACCTTCCTTGGAT GGGAAAAGTTGCAAGAGATTGCTCTTGGCATAGCCAAAGGAATTGATTATCTTCACCAAGGTTGTGATCAGAGGATTCTT CACTTTGACATCAATCCTCATAACGTCTTGCTTGATGACACCTTCACTCCAAAGATTACTGACTTTGGTTTGGCTAAGCT GTGTTCCAAGAATCGAAGCACGGTGTCCATGACTGCAGCCAGAGGAACACTAGGCTACATGGCACCTGAAGTTTTTTCTA GAAACTTCGGCAATGTGTCTTACAAGTCTGATATCTACAGTTATGGGATGCTATTGCTAGAGATGGTTGGAGGGAGAAAG AATATTGTAAACAACACTACAGGTCAAGAAAATAATAATGTTCAAGTTCTGTATCCAGATTGGATACATGGTTTGGTTGA AGGAAGAGACATGCATGTCCGTATTGATGATGATGAAGAGGGAGATTTTGAAATTGCAAAGAAACTAGCTATTGTGGGAC TTTGGTGCATTCAGTGGCATCCTATGCATCGTCCATCCATGAAGACTGTGATGCAGATGCTCCATGGAGAGGGAGACAAG TTAAAAGTTCCCACCAACCCTTTCCAGCCAAAAACTTCAGCTAGTACAAGCAGTACTAGTGGTACTATTGTTGCAAAACG TCTGAATTTGGAGCTGGAAGTGATTCAAGAGTTAGATTAG
Protein sequence (LotjaGi1g1v0012200.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKGEDHARVEKFLKDYRALKPTRFSYADIKRITNKLKEKLGEGAHGAVYKGKLSTQILVAVKILNNSEGDDGTKFINEVG TMGKIHHVNVVRLLGYCADGFHRALVYDYFPNGSLQNFIVSSPNNKDKKTFLGWEKLQEIALGIAKGIDYLHQGCDQRIL HFDINPHNVLLDDTFTPKITDFGLAKLCSKNRSTVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRK NIVNNTTGQENNNVQVLYPDWIHGLVEGRDMHVRIDDDEEGDFEIAKKLAIVGLWCIQWHPMHRPSMKTVMQMLHGEGDK LKVPTNPFQPKTSASTSSTSGTIVAKRLNLELEVIQELD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 357 | 357 | 4.2E-226 | – | |
| PANTHER | 1 | 357 | 357 | 4.2E-226 | – | |
| Gene3D | 8 | 109 | 102 | 9.7E-26 | – | |
| SUPERFAMILY | 18 | 314 | 297 | 1.24E-72 | ||
| ProSiteProfiles | 34 | 329 | 296 | 36.881 | ||
| Pfam | 36 | 312 | 277 | 9.4E-48 | ||
| ProSitePatterns | 40 | 62 | 23 | - | ||
| Gene3D | 110 | 329 | 220 | 4.5E-52 | – | |
| MobiDBLite | 321 | 340 | 20 | - | – | |
| MobiDBLite | 326 | 340 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0012200.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…