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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0012500 |
| Transcript ID | LotjaGi1g1v0012500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like protein kinase; TAIR: AT1G18390.2 Serine/Threonine kinase family catalytic domain protein; Swiss-Prot: sp|P0C5E2|LRL12_ARATH LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2; TrEMBL-Plants: tr|A0A072VQB2|A0A072VQB2_MEDTR Stress-induced receptor-like kinase; Found in the gene: LotjaGi1g1v0012500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:1558432..1563428) extracted from Lotus japonicus Gifu genome v1.2.
ATTGAGTCCTTACTCCTTACAATGAGGGTATATGAATCAAGTTCCACTCCAATCACTGAACTTGAAGTGAAACTATCAAT CAATCATGAAATCCTTCTTTTCTTGCTTCCTCCTCCAAATTATAGTTTTGCTACTGATCCTGCAGCTGCATGAAGAAACT TGTTTTGCTGCAACAACTAATAAGTCAGCAACATGTCCTCCTTCTCATTGTGGCAATATCACTAACATAATGTACCCATT TCGGCTGAAGGGTGACCCTGCAACCTGCGGGGATCCGGAGTTCGAGTTAGAATGTGTAAACAACAACAGCACATTGTTGT TACATCTGTTTCCAGGCAAAAACTACCATGTGAAGGCAATCAACTACAACAATTTCACACTCCGGCTCGTCGATCCCGGC GTTCAAGAGGCTAATAATTGCTCCTCCATTCCTCGCTATTCCTTATCCAAACTCAATTTCTATCTTAACAACGAAGGCCC TTATGAATACATGCGTCAATATAGTTTATTTGATGAAGATCCTTATGAAAGCTCGCCATTGTTTCAGCACGTGATTTACA TGAACTGTAGCAATCCAGTGAAGGATGATCCACTGTATGTGGATACATCTCCCTGCATCATCAATTGGCATGAGCATGAT GACTCACATGTTTATGCCATCGTTGGAGACTTGACGGCTGGGAATTTGAAACCTCAGTGCCGACAAGTGAAGCTTGTTGC TCCCATATCCTCGGTTTCTGGTTACTTCAATTCTAGTAGTCATACGTTTTCGTACGATGAAGTTCATAGGATGCTTGTGC ATGGATTTGAGGTTTCATGGATGAAGCGTCCGTGTGAAGATCATTGTGGAAAACCAGAATATTGCTATTTGAGTGAAAAT ACAGAGACTCTTCAATGCGACTTAACGCATAATCAATGTAGAACTCCATTGGGATTTCTCGCCAGATGCGGTAAGTAGTA ATTTGCATCCATGTTATAACATGTGTCGGGCTGGTCGCAGTGGTTAAAAATGATTGTTTTGAATCTTTGAGTTCGGAAAT TCGAACTTTTTGAAATACACAACACACTCTTGAGAAAATCTTTTTATCATGTTCGGAACAAATAGGTTCACTTTAATAGA AGATAGACTCATCAAACTTTAACTTTGTTATCCTCACTAAATTTTGAGTTTTTTTTTTTCTTTTAGGAAATTTGTCAAAG GGGCGCATATTTGTCGATGGTATTATATTCGGTGTTGCTCAAGGTAATATTTTACTTCAAATTACATTTTTTCACAAAAT CATTTGGATACTAATTATAAGCTTTTAATTTATCCAATTTAGTATTAAATTTGTAGAAAAAGAGGTAATAAGTATTTTCC TTTAAATTTTATTGGTAATCACTAATTTGTCCTAGTTTTAAATCCTATGGAACAATATCTTATGTTTACTTTCTTGCCAT GGTATATTCTTACACAGGACTACTACAAGTATTTGGCATAATGAAATATGATAAATCTTTTGGCATTTCGGATTCTCAAC CTGGTCTTGAGATAGGAAGAGTTACAGGAAAATATGTCTTGTCATCATATATTATTATGAGATTTATGTTAGGTCTCATA GTTTTCTTTGGAAAACTGACACATATGTATCGGACAAGGCATACATCAGATTATGAAAATATTGAAGATTTTCTTCAAGA GAACTCTCTCATGCCATTAAGGTATTCATACAAAGAGATAAAGAAGATGACTAGAGGTTTTAAAGAAAAGTTGGGTGAAG GAGGCTATGGCTCTGTTTATAAAGGAAAACTACGTAGCGGACCTTTGGTTGCCGTAAAGATGTTGAGCAAGCCTAAGGCT AATGGACAAGAATTCATTAGTGAAGTCGCAACCATAGGAAGAATACATCATGTCAATGTGGTGAAACTTGTTGGATTTTG TGTTGAGTCATCCAAACGTGCTCTTGTTTATGAATTCATGCCCAATGGCTCTCTTGATAGATATATTTCCCCTAAAGGGG ATGCTACCTCTCTAACATGTTGTCAAATGTACTCAATATCTCTTGGAGTGGCACGAGGTATTGCATATTTACATCAAGGT TGTGACGTGCAAATTTTACATTTTGACATCAAGCCTCATAACATCCTTCTTGATGAGAACTTTATCGCTAAGGTTTCAGA CTTTGGTCTTGCAAGACTTTACCCAATTGACAATAACATTATCACTTTGACCACAGCAAGAGGAACAATTGGTTATATGG CTCCAGAACTATTTTATAAAAATATTGGCGGAGTGTCCAACAAGGCTGATGTCTATAGCTTTGGAATGCTTTTGATGGAA ATGGCAAACAGGAGAAGAAATTTGAATCCATATGCAGATCATTCAAGCCAACTTTTCTTTCCCTATTGGATTTACGATCA ATTAATTGAAGAAAGGGAAATAGAAATGGGAGAAGTTACCACTGAAGACAAGAATAAGGTGAAAAAGATGTTCCTAGTTG CTATATGGTGTATACAAATGAGACCTGATGATCGTCCTTCAATGAACAAAGTAATAGAGATGCTTGAAGGAGATGTTGAA AGCATTATAATGCCTCCAAAGCCTTCTCAATATCCAGATGAAATTGAACTCAATTACGATGAATTTGTATCATGTGATGC TTCTAGCTCAATATGTTTTCTCGAGGAAACTATAGAAGATCCTTTATTGAAGGATTGTTCTTAATGTTTGCTAATGATTT GTTTTTTAAATTATATTTCTTAGTTATTTATTAAAAATATTGTTCAAGTTCTAAAATCCAATGCAAAATCTACCATGTCA ATGCAATCAACTACAACAACCTCACACTCCGGCTAGTAGATACCGACGTTGAAGCCACCAATTGCTCTTCTCTTCCTCGC CATTTCTTATCCGCACCCAATTTCACCAGCTCTTACGATTCTCTCTACTTGGAGGATCTGTATGAAACCCCTATCTCTCG ATTCCAGTACGTGATTTACTTCAATTGTAGCGATCCAGTGAGGGGTGATCATCGATATGTGGACCCATCTCCCTGCCTCC GCCTCAACAACGGCCATGTTTATGCTGTCGCCGGAGACCTCTCGGCGCCAGAGTTTAAAGCTGACTGCCACATCATGCTG GTTGCTCCGACGTCGCTGTACAGTGACAGTGACATTGACATGCAGTTTCGGAGATTTTCATACGAGCAAATTCATAGGAT GCTTGTCTATGGATTTGAAGTTTCGTGGATAAGCAGCCACCTTTGTAGAAATCATTGTGGAAAAACTGATTGCCTTCTAA ATTACAACAACCCGGAGGAGACACTTCAATGCAAAGATCGTTACTGCACTTCTCCATTGGGATATTATGTCAGATGTGGT AAGAATCAAAAGAGCTTATTTGAGCTTATCTGATGACATAAACTCTTATGTCAGTGTTTCGGAGAGATTATGCAAATAGC TTATGACACACCATAAGCTGTTTTGAGCTTATTTAGCTTATGAAAAAAAATTTATGCTTATATATAACTTATTTTTTATT TATTTCAATAAAAAATTTAAAATACCTTATGAATAAGCGCTTATGATCATAAGCGCTTAATTAAGTTGTGTTTCCAAACG AGTTAGGGTTTCTGATTTTGTAAGTTTTTTTTTTTGAAGGTCCTGATTTTGTAAGTTAATTTGGTTTTAGTTTATCGGCA TGAAGTCAAAAACGGCCGATAATTATAAAAATGATTGTCACTAGCTACGGTCATTTTTCTGTCGAAAGACTAAAATAAAA CTCGCTTACAAAATTAGAGATTAATTTATCCATTGATCATATATATATATATATTTCCAACGATTACATCATTTTTCAAT TCTATTTGTTTTCATTTGAAATATTCTACGAGTATGTATGAACAAGTATAAATAACAACTCATTCCTTTTTTCTTCTTCT TTTTATAGAAAAACTGTCAAAGAGCCGCATATTTGCTGAAGGTAAGGAGGAACTTGTCCCTTTTTTCATATTCTTTAACT CTTTAAGGCACCATCTAACTCTATCCTTTTCTATAAACTTAAACATCTAAATGTAGAAACTTATTTTCATATGATCAAAA TAACCAATTGTTAGTACTTATTTGTAGTCTTTTATACTCTTCCTGTTGACTACACTAATTTATTTTTTATTTTGCAGATA TTACACTCGGGATTGCTCAAGGTATTATACATCACTTTATGAATTAAAGAAGTAAAAAGGTATTTTCTCCTAGTTTTGAA TGCAACAATCTTATATGATTGCTTTCCTGACATGTACACAGGAGTACTGCGAGCAATGAGGTTTGTGGTATATGATAGAT CTGAGGGTATTTCGAATTACAAACTCGGTTTTCAAATAGGAAGATTAATCACAGGAAAGTATGTCTTGTTACCATACATT ATATTGAGATTTATGATTGGTCTCATCGTTTTCTTTGGAAAGTGGATACATATATATTGGGCTAGACATTCATCACTTTA TAAAAATATCGAAGATTTTCTTCAAGGAAACCCTCTTGCCAATAAGGTATTCATACAAACAGATAATGAAGATGACTGGA GATTTTAAGGACAAGCTGGGTGAAGGAGGTTATGGCATTGTTTATAAAGGAAAGCTACGTAGTGGACCTTTGGTTGCCAT AAAGATGTTGAACAAATCTAAGGCTAATGGGCTAGAGTTCATGAGTGAAATTGCAACCATAGGAAGAATACATCATTCCA ATGTGGTGAGACTTGTTGGATTTTGTGTTGAGGCCTCAAAACGTGCTCTTATTTATGAATTTATGCCCAATGGTTCTCTC GATAGATATATTTCCTACAAAGAGGGTTCTATCTCTCTAGCTTATCATCAAATGTACACAATATCTCTTGGAGTGGCTCG TGGTATTGCATATCTGCATCAAGGTTGTGACGTGCAAATTTTACATTTTGATATCAAGCCCCACAACATCCTTCTTGATG AGAACTTTATTCCCAAAGTTTCAGACTTTGGTCTTGC
CDS sequence (LotjaGi1g1v0012500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAATCCTTCTTTTCTTGCTTCCTCCTCCAAATTATAGTTTTGCTACTGATCCTGCAGCTGCATGAAGAAACTTGTTT TGCTGCAACAACTAATAAGTCAGCAACATGTCCTCCTTCTCATTGTGGCAATATCACTAACATAATGTACCCATTTCGGC TGAAGGGTGACCCTGCAACCTGCGGGGATCCGGAGTTCGAGTTAGAATGTGTAAACAACAACAGCACATTGTTGTTACAT CTGTTTCCAGGCAAAAACTACCATGTGAAGGCAATCAACTACAACAATTTCACACTCCGGCTCGTCGATCCCGGCGTTCA AGAGGCTAATAATTGCTCCTCCATTCCTCGCTATTCCTTATCCAAACTCAATTTCTATCTTAACAACGAAGGCCCTTATG AATACATGCGTCAATATAGTTTATTTGATGAAGATCCTTATGAAAGCTCGCCATTGTTTCAGCACGTGATTTACATGAAC TGTAGCAATCCAGTGAAGGATGATCCACTGTATGTGGATACATCTCCCTGCATCATCAATTGGCATGAGCATGATGACTC ACATGTTTATGCCATCGTTGGAGACTTGACGGCTGGGAATTTGAAACCTCAGTGCCGACAAGTGAAGCTTGTTGCTCCCA TATCCTCGGTTTCTGGTTACTTCAATTCTAGTAGTCATACGTTTTCGTACGATGAAGTTCATAGGATGCTTGTGCATGGA TTTGAGGTTTCATGGATGAAGCGTCCGTGTGAAGATCATTGTGGAAAACCAGAATATTGCTATTTGAGTGAAAATACAGA GACTCTTCAATGCGACTTAACGCATAATCAATGTAGAACTCCATTGGGATTTCTCGCCAGATGCGGAAATTTGTCAAAGG GGCGCATATTTGTCGATGGTATTATATTCGGTGTTGCTCAAGGTAATATTTTACTTCAAATTACATTTTTTCACAAAATC ATTTGGATACTAATTATAAGCTTTTAA
Protein sequence (LotjaGi1g1v0012500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKSFFSCFLLQIIVLLLILQLHEETCFAATTNKSATCPPSHCGNITNIMYPFRLKGDPATCGDPEFELECVNNNSTLLLH LFPGKNYHVKAINYNNFTLRLVDPGVQEANNCSSIPRYSLSKLNFYLNNEGPYEYMRQYSLFDEDPYESSPLFQHVIYMN CSNPVKDDPLYVDTSPCIINWHEHDDSHVYAIVGDLTAGNLKPQCRQVKLVAPISSVSGYFNSSSHTFSYDEVHRMLVHG FEVSWMKRPCEDHCGKPEYCYLSENTETLQCDLTHNQCRTPLGFLARCGNLSKGRIFVDGIIFGVAQGNILLQITFFHKI IWILIISF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 28 | 28 | - | – | |
| SignalP_EUK | 1 | 28 | 28 | - | – | |
| Phobius | 1 | 28 | 28 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| PANTHER | 4 | 275 | 272 | 7.8E-63 | – | |
| PANTHER | 4 | 275 | 272 | 7.8E-63 | – | |
| Phobius | 4 | 19 | 16 | - | – | |
| Phobius | 20 | 28 | 9 | - | – | |
| Phobius | 29 | 328 | 300 | - | – | |
| Pfam | 35 | 117 | 83 | 2.8E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Polysaccharide binding | Interacting selectively and non-covalently with any polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically. |
Expression pattern of LotjaGi1g1v0012500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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