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LotjaGi1g1v0012700.1

Overview

Field Value
Gene ID LotjaGi1g1v0012700
Transcript ID LotjaGi1g1v0012700.1
Lotus japonicus genome version Gifu v1.2
Description Receptor-like kinase; TAIR: AT1G66910.1 Protein kinase superfamily protein; Swiss-Prot: sp|P93604|LRK10_WHEAT Rust resistance kinase Lr10; TrEMBL-Plants: tr|A0A072VFM0|A0A072VFM0_MEDTR Receptor-like kinase; Found in the gene: LotjaGi1g1v0012700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:1594994..1597392) extracted from Lotus japonicus Gifu genome v1.2.

CAGAAATACCTTGAGCTTTAGAATCAAAATTACCCTGAGATTCATAATCTGTCCCTATGCCCATTCCATTTAGTAGTCCT GTGTATGATATACCATAGCAAGAAATTAAGCATATAATACCGTTGCATAAGATTCAAAACTAGGAGAAAATACCAAAAAA AAGTTAAGCAAATTATTACATGTTTCATAATGATATGCCCTCCCAAAAGACAAAGCTTTGTTAGTGCGGTAGGCCTTGAG TTTCACGAGGCATGTGTTTTGCATATTCAAATACAAAGCATGAAATACAATATTGTTGGTATCTTTCTTTCAGAGGGAGA TGAAAAACACATGATATAGATTAGACAATGAATTAAGTGTTAAGTGATTTGCTAGGTAAGGTATCACAGTTAGTTCAGCT TTGATGATGACAATGGTAGCGCTGCTAATAATTCTGCTGCTGCTCTTCATGAGTAGTGTTGGAAATGGTCACAATGACAC CTCAATTGGATGTCCCTTTCGTCTATCATATGCTAATAACAGCAATGGTCAGATGATTGAATTTCCAGCACTTCCAGTCC CAGTAAGTCTCCTTCTCACCTACATAGATTGCGAAACAGGATCAGTACAACTGTCTGATCCCGAGAACTGTCTTCCAGGA CTCCTTGCAAGACACAATTCCTCATTATTTAATCCTTTACAATTCGACCAGTCCTTAATCCAGAATATTACTTTCTTCGA TTGCTCTTCAATTGGACAACACCATCTGAAAAACACGGGTCAAACATGGCCTGGTGCGCAAGATATGCTGGCTTGTCCAA TTTATGTCGCCGACTCTAGCGAAAGTGTCCTACAATTGGACCTGTTTCAGTGCAACAAAATGTTCGAGCAAGGATTTCCT TTATCTGCATCTGAGATACGACTAAACTCAATCTCACTGACATTGTCAGAAACGGTTTTTGATAGCGGATGCTTAAAATG TGAGCATAAATCAGAGAACAAATCAAAGAAAAAGATACCTGTATACCCTATTTTGGCAGCTGCAGGTGAGATCAAACAGA CACCTTAGTTTGTTCGTGCACGTTTGGTCATCGTTTTGTTTTGTTTTCACTTGAAAATGACTTTGTTTCCTTCTGAATTT TGCAGGTGCAATTGTTGGTTTAACTGTGCTGGTGTTTCTGCTACGTGTCCTCATTGGAATACATCGACATTTTAGGATGA AAGGCGAGGAATCATGAAAGATTTGAGAACTTTTTGAAGGATTTCAGGGCCTTAAAGCCAGCCAGATTCTCTTATGCTGA TATCAAAAGAATCACACACCAGTTCAGGGAAAAGTTAGGTGAAGGAGCTCATGGAGCTGTCTACAAAGGTAAATTGTCCA CTGAAATTCTGGTTGCTGTCAAGATCCTCAACAACACTGACGTAGATAATGGAACAGAGTTCATCAATGAAGTGGGAACC ATGGGAAAAATCCACCATGTCAATGTCGTTCGCTTGCTTGGCTACTGTGCTGATGGGTTTCACAGAGCTTTAGTTTATGA CTTTTTCCCAAATGGGTCGCTGCAGAATTTCATCATCTCAGCACCCCACAACAAGGATAAGAGTACCTTCCTAGGATGGG AAAAGTTGCAAGAGATTGCTCTTGGCATAGCCACAGGAATTGATTATCTTCACCAAGGCTGTGATCAGAGAATTCTTCAC TTTGACATCAATCCTCATAATGTCTTGCTTGATGACACTCTCACTCCAAAGATTACTGACTTTGGTTTGGCTAAGTTGTG CTCCAAAAATAGAAGCACTGTGTCTATGACTGCAGCCAGGGGAACACTAGGCTATATTGCACCTGAAGTGTTTTCTAGAA ACTTCGGCAATGTGTCTTATAAGTCTGATATCTACAGTTATGGGATGTTGTTGTTAGAGATGGTTGGAGGAAGAAAGAAC ATTATAAACAACACTCCAGGTCAAGAAAATAACAATGTCCAAGTTCTGTATCCAGATTGGATACACAGTTTGGTTGAAGG AAGAGATATGCATGTCCCTATTGATGATGAAGAGAGTAACTTTGGAATTGCAAAGAAATTGGCGATTGTGGGACTTTGGT GCATTCAGTGGCATCCTATGCATCGTCCATCTATGAAGACTGCGATGCATATGCTCCAAGGAGAAGGAGACAAGTTAAAA GTTCCCACAAACCCTTTCCAGCCAAAAGCTTCAACTAACACAAACACTACTATTGCTGCTGCAGAACGGTTGAATTTGGA GCTGGAAGTGATTCAAGAACAAGATTAGATTGACTATTACATTTTTATTAATTAGTTGATACCTTTTAGCAATGTACTTG TTTATTAATTTATTTCCATGTAAAACTGAAGTTAATGATAAAGAAAATGTCATTATTGCTGGGACTCCTACTACATTTC
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0012700.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGAAAAATCCACCATGTCAATGTCGTTCGCTTGCTTGGCTACTGTGCTGATGGGTTTCACAGAGCTTTAGTTTATGA CTTTTTCCCAAATGGGTCGCTGCAGAATTTCATCATCTCAGCACCCCACAACAAGGATAAGAGTACCTTCCTAGGATGGG AAAAGTTGCAAGAGATTGCTCTTGGCATAGCCACAGGAATTGATTATCTTCACCAAGGCTGTGATCAGAGAATTCTTCAC TTTGACATCAATCCTCATAATGTCTTGCTTGATGACACTCTCACTCCAAAGATTACTGACTTTGGTTTGGCTAAGTTGTG CTCCAAAAATAGAAGCACTGTGTCTATGACTGCAGCCAGGGGAACACTAGGCTATATTGCACCTGAAGTGTTTTCTAGAA ACTTCGGCAATGTGTCTTATAAGTCTGATATCTACAGTTATGGGATGTTGTTGTTAGAGATGGTTGGAGGAAGAAAGAAC ATTATAAACAACACTCCAGGTCAAGAAAATAACAATGTCCAAGTTCTGTATCCAGATTGGATACACAGTTTGGTTGAAGG AAGAGATATGCATGTCCCTATTGATGATGAAGAGAGTAACTTTGGAATTGCAAAGAAATTGGCGATTGTGGGACTTTGGT GCATTCAGTGGCATCCTATGCATCGTCCATCTATGAAGACTGCGATGCATATGCTCCAAGGAGAAGGAGACAAGTTAAAA GTTCCCACAAACCCTTTCCAGCCAAAAGCTTCAACTAACACAAACACTACTATTGCTGCTGCAGAACGGTTGAATTTGGA GCTGGAAGTGATTCAAGAACAAGATTAG
Download CDS Sequence

Protein sequence (LotjaGi1g1v0012700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGKIHHVNVVRLLGYCADGFHRALVYDFFPNGSLQNFIISAPHNKDKSTFLGWEKLQEIALGIATGIDYLHQGCDQRILH FDINPHNVLLDDTLTPKITDFGLAKLCSKNRSTVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKN IINNTPGQENNNVQVLYPDWIHSLVEGRDMHVPIDDEESNFGIAKKLAIVGLWCIQWHPMHRPSMKTAMHMLQGEGDKLK VPTNPFQPKASTNTNTTIAAAERLNLELEVIQEQD
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR27009:SF138
1 273 273 4.0E-172 –
Gene3D
G3DSA:3.30.200.20
1 29 29 1.9E-6 –
PANTHER
PTHR27009
1 273 273 4.0E-172 –
ProSiteProfiles
PS50011
1 247 247 30.266
IPR000719
SUPERFAMILY
SSF56112
1 232 232 1.12E-56
IPR011009
Pfam
PF00069
2 230 229 5.4E-34
IPR000719
Gene3D
G3DSA:1.10.510.10
30 251 222 6.0E-50 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0012700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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