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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0020600 |
| Transcript ID | LotjaGi1g1v0020600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Altered inheritance of mitochondria protein 32; TAIR: AT4G26620.1 Sucrase/ferredoxin-like family protein; Swiss-Prot: sp|P43469|AGAL2_PEDPE Alpha-galactosidase 2; TrEMBL-Plants: tr|A0A1J7HCU8|A0A1J7HCU8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0020600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:2534043..2537769) extracted from Lotus japonicus Gifu genome v1.2.
TTTAATGTAAAAGAACATGTTCTTATTACACTCTTTGCTAATGTTGGATCTAGTGGAGTTTATGTCACAAATGTAACAAC AATTGTCAATGCTTTCTGTCCCTAGAGAATCAATCTTCTGACTGATTTGACAGAAATAACAACAAAGCAGCCAGAAGATT GATTCTCTTGCGGTAGAAAGCCATGACGATTGTTGTTACATTTGCGGCAAAATCTTCATTAGATCCAACATTAGCAGAGA TTGTAATAAGAACATGTTCTTTTACATTAAAAGGTCCAGGATTTGCAGTCCATCTAAAATTGGTGAAAGGCGCTTTGAAC TCTATGGTAGGAAGTGTCGCAGCCATAAACCTCCCAAGCAGAAGAGTAAGCACTTGAGCTAGGAATGGAGAAACATTTGT TGGGTTGTCTTTGTGAGTCAGTAGTGAGTTTACAAACGCAAGACACGCACATGATGACAACCCTAGAAACCATGTCTTGA ATAGGGCTGAGAGAGTTGGGTCATCTGTTATCGGAACTGTTTGCCTGATCTTCTCTATAGGACAATCATCCACCTCCTCC GTGTCATGTACAACATTACACAAACATTTAATTAGCACTCTAAAATGAAAAAACAAAAGTACAAAGACGCATGAGGATGA AATGATACTTCCTATGGAAAACATCCTCAGAATATGGTCAATTGTTGCACCATAATCTTGGGTGAAGTGTTTGTTAGCCC ATGCTCTCATATTGGGGGACATATGTATGCTGGAATCATCATTATATTTGGACCAACCATGAATGGAGAAGTCACCGGGG CACTGGTAAGGAGAAGATTTTACGGTTGTTGAAATTCCTTTTTGTGACAGAATTTTCTGTTTAAATCTTTGAATACCTTT ATTCCATTGTTTATTCTGATATTCTCTTCAACTTAAATATGCAGGTATGGATATGTTAGCCCGGATGATGTACCTTTATT GCTTCAACAACATATTATAAAAGGGGAGATTATAGACTCATTATGGAGGTAGTTAATGTTTTATAGTTCTTTGTTTTCTC TACTGTTTTGGCTAACCAATTTTGAATTTTGCTAACTTGTTTTCATTTATATATTTACTGAATTTTGCCATCAGGGGTCA GATGAGTTTATCAGAAGATGAACAGATGAATAAACTAGAACAAAGGCTTCTGCTGAGTGAAATCAGAAATGTAGAAGAAA GCACTTCGGAGTTCGATCGCTTGCCTAGGTTGCTCTATGCAGTAGTTATGGCCAGGAAGAACCATATGAAGAAGGAGGTG CTGTTCCTCCACCTTGCCCTTTGGGTGTTGTTTCTACAAACTTGGTGTTTTCAACTTGTGGGTTTGTGAATCCATTTCTA AAGCATGCAACTCTTTTAGCATTAACCTAGATGTTGGAAATTATAATAGAAGTCCCTGAATGGATGATGTAATGAGTGAT CCACTTGCCATTGGCTGTTATAACAAGTTTTGGTGTTTGTGACATGTGGGTAAAGCATACAACTTTTTCGTAGTAATCCC TAGATGATGGATACTATACTAATAGCATGTTTGGAAATTCATTGATTTTGAAGTCAAAATCAACTTTGGGGAGAAGTTCT GGAGTAGCCTTTGAGTTTCAGAGTTCATTCGGATAGAACATAAGCTGATCCAAACATACTATTGTAGTTTCCAGAGTTAC CGTGATTTGGATTGTGTGCCTACTGCCAATGCAAACACTATAAAAGTTCTTAAATGAGTTGTAAGCTGCATAATCACTTT TGAGTAGAAGCTACAAAGTGTGTGTACCTTCTGGTTACTGTGCTTTGGATTGTGTGCCTACCACCAATCCAAACACACTA TAAAAGTTATTAAATGAATGTTGTAATGAGTGATCCACTTGAAATTGGTTGGTATCACAAATTTTGTTAGTATAAGGTTT TAGCTTTATGATGTGTGTTAAGGGTGTTAATTGATTATATTGTGAAAAATGTTCAATCTTCATGTTTGTTCCTCTTACAT TCACTTGGGATGATTTTGCCTTGGACTTATGCCTGGTGACTTGTTTATGTTCTAGACTCGATTAACGATATATGAGGTTC ATGATGGGACTGAAACATCTAACGGGGATGTCTTAATCTTTCCTGACATGATCAGATACAGGTCAGTACAAGCTTTTGTT TTGCAACATCTGATTCCTCATTCATTATGGTTCTCTGTAGTTTTCCCCTACATTGTTGTCAACAACTAATTTTAGTGTGA AATTGCAGGAGGTTAACACATTTTGATGTTGAAACATTTGTTGAAGAAGTTCTTGTGAAGGATGGAGAATGGCTTTCCGA ATCTTTGAAAGGTTCATATGTTTTTGTGTGTTCACATGCATCCCGGGATCGCAGATGTGGGGTTTGTGGACCTGTCTTGG TCAGTAGATTCAGGGAAGAGATAGAGTTGCAGGGTCTACAGGGTAAAGTGTTTGTGAGCCCATGCTCTCATATTGGGGGA CATAAGTATGCTGGAAACATCATTATATTTGGACCAACCATGAATGGAGAAGTCACTGGGCACTGGTAAGGAGAAAATCT GCGCAATTGTTGAAATTCCTTTCTTTGACAGAATTTTCTGTTTATAATTTTAAATCTTGGAGTACCATTATACCATCGTT TATACCAATATTCTCTTCAACTTAAATATGCAGGTTTGGATATGTTAGCCGGATGATGTACCTTTATTGCTTCAACAACA TATCATAAAAGGGGAGATCATAGGGTCATTATGGAGGTAGTTAATGTTTTATAGTTCTTTGTTTTCTTTACTATTTTGGC TACACAATTTTGAATTTTGCTGACTTGTTTTCATTTATATGTTTACTGAATTTTGCCATCAGGGGTCAGATGGGTTTATC AGAAGATGAACAGATGAATAAACTAGAACAAAGGCTTCTGCTGAGTGGAATCAGAAATGTAGAAGAAAGCACTGCAGTGT GTAGATCTCAAGATGATTTCGCGAGCTGCTGCCAAGAAAATGGAATGAGCTTCTGCCAAGAAAATGGAAACTCTTCCTAC TGTAGTCAAAATCATGTGCCGGCGGTGGAAAAGAGAAAAGAGCCTGATGTCATTGAGATGGAGGCGAAGCTCTCAGCTGA TATTAAGACCAGTGAGACTGTGATTTCGCAGATCAACAGTGGTAAAGGAGCTTCATCGCGTAAGTTCCATTCCATGACAA CATGGCTAGATACCTGGGAGCAAGAAGACACTTATGCTGCTCTTGCTGTAGTCTTTGCTGCAGTGTCAGTTGCCATTGCC TATAACTCCTACAAACAATTGGCATAAACTGAATCACCATTGAGAGTGTTATTTAGTGGGGTTAGATAACTTAACTTCTA TTATGTTTGTATATTACTAGTAACTTCATTTGTCTAATCCCGGTGCAGTGATTAAGATCATTCCTAACTGAACATGCAGG GAAACGAGGAAGGGCTTTATCATTAGTCTGGGTTTGTGTGCTTTTCTGCTGGTGGAATATTGTTGGCTGGTGCACTTATA ATTTGCTAGTTAGCTTAACCTGTAGTCTGTACATATAAGAAACCTTAGCCTCAGAATATTCAGGTTAAATATTGATAGTT TGTTTAGGTAGAATTTGATTTGTATCCTTTTTTTTTAAATTTAATTTTATGGAAAGCTTTGGTGTTCATTGAATTGCTAG TTGGTGTGTTTGAATATCAGCTGACGTGAACTGTCTTTCATTGGAAT
CDS sequence (LotjaGi1g1v0020600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTTATCAGAAGATGAACAGATGAATAAACTAGAACAAAGGCTTCTGCTGAGTGGAATCAGAAATGTAGAAGAAAG CACTGCAGTGTGTAGATCTCAAGATGATTTCGCGAGCTGCTGCCAAGAAAATGGAATGAGCTTCTGCCAAGAAAATGGAA ACTCTTCCTACTGTAGTCAAAATCATGTGCCGGCGGTGGAAAAGAGAAAAGAGCCTGATGTCATTGAGATGGAGGCGAAG CTCTCAGCTGATATTAAGACCAGTGAGACTGTGATTTCGCAGATCAACAGTGGTAAAGGAGCTTCATCGCGTAAGTTCCA TTCCATGACAACATGGCTAGATACCTGGGAGCAAGAAGACACTTATGCTGCTCTTGCTGTAGTCTTTGCTGCAGTGTCAG TTGCCATTGCCTATAACTCCTACAAACAATTGGCATAA
Protein sequence (LotjaGi1g1v0020600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGLSEDEQMNKLEQRLLLSGIRNVEESTAVCRSQDDFASCCQENGMSFCQENGNSSYCSQNHVPAVEKRKEPDVIEMEAK LSADIKTSETVISQINSGKGASSRKFHSMTTWLDTWEQEDTYAALAVVFAAVSVAIAYNSYKQLA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 121 | 121 | - | – | |
| PANTHER | 1 | 144 | 144 | 6.0E-27 | – | |
| PANTHER | 1 | 144 | 144 | 6.0E-27 | ||
| Phobius | 122 | 141 | 20 | - | – | |
| Phobius | 142 | 145 | 4 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0020600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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