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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0022400 |
| Transcript ID | LotjaGi1g1v0022400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Hydroxyacylglutathione hydrolase; TAIR: AT1G53580.1 glyoxalase II 3; Swiss-Prot: sp|Q9C8L4|ETHE1_ARATH Persulfide dioxygenase ETHE1 homolog, mitochondrial; TrEMBL-Plants: tr|I3SCH3|I3SCH3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0022400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:2754880..2758719) extracted from Lotus japonicus Gifu genome v1.2.
CTGCTATACCCGGTTGCATGGTGCGATGTAATTGCCGCAGGATCATCCTCTGTGATCCTCTGCTTCAATGGCGTCGCTAG CTATGCTCTCTGCTTCTTCCTGATCGAAACCATCATCCTCAATTTCCAATCACAGTTCATCTCCATTCTCACTACCAAAA TGCTGCGATTTCACTCTCTCAGATTCTCCTCTTCTCTCTTCGCTCCACCTTTACCTCTCTCCCCAGTTTCCATTTCCATC ACCAAACCCACCAGGCTCACACCACGAATGGCTTCTTACTCCACTTCCTCTTCTTCTTCCAAGCTCTTGTTCCGTCAGCT TTTCGAGAAGGAATCATCCACTTACACCTACCTACTCGCTGATGCTTCTCACCCTGAAAAACCAGCACTTGTAAGTTTCC TCCCAAACTATTAAAAATTGAATTTTGAAGTGTGTATTTGAATATTCATGGGAAATTTTCATCTGGGTCGGAAGCTTTTA TTGGATTGGATAATGGGTTTCTTTTGTTTTGGTGATTCATGGATTTTTTTTTTTTTTTTTTTACAAAAGTTCAGTTGATT GACCCGGTAGATAAGACAGTGGATAGAGACTTGTCCCTCATTCAACAACTGGGGTTGAAGCTTGTGTATGCCATGAACAC ACATGTACATGCTGATCATGTCACTGGGACTGGCCTAATCAAGGTTTGCTGCTGCTTTGTGATTTTTTTTCCTCTATAGT GAGCAAGAAATTATGTATCTAGCTTAATGTAATTTATAGGATATTATGATCTTAATCCACCAAATAATTTATTGGTAGAT GTACCCTTACTCAGTTTATTCATAGAGAATTCTTTTTCAAAATTTGTAATTTCTTTGATGTTAGTGAAAGTAACTTAGGG TGTTTTTGTTATCCATTATTGTATAGAGCAAAGTTCCTGTTGTAAAATCTGTTATTTCAAAAGCAAGTGGTGCGACCGCA GATCTTCATGTGGAGCAAGGCGATAAAGTCCATTTTGGTGATCTTTTTCTAGAGGTAAGTCTGTGGCTGCATGCCTAGTT TGATGCCTACCTCTCATTGTGGTTTTGTAAAGCCTGATAACCAGTGTTATAACTCGAACAGTTTTTCAACGTTGGTGTTG TTTTCTAATGCCGGAGAATTGTAAAAGCCATTATACATTTCACTAAGTTTAAGATAAGGGAATGAGTGGTTCTATATATG CTGCTTGGACTTTCTGTTTCAATATAGTGCTTGGTAAATTTGAGAATTGGGTCCACAAATCTCTAAAATCAGGAAAACTG ATAAAATATGATTTAGATGCAGTTTTGGATGTCACCACATGGTTTAAGATATGGCTAGCAACATTTCTAGATAATGGGAT CCAATTCTGATTAGTCAAGCAGGAAGATAGATCATAGATACGTCTCTCGTTGTAGCTTAATCACTATGGCTGTAATCTTT TGCAGAAAATATTAAGGCAAATCAAGGATGACTTCACCATATTATTAATTATAGATGAAATAATGAACTTTTTTAATAGT CCTGACTCCTCATATACTTGGGAATTGGGATATGCTAAAAAGAATGATCTAGGCAAAGTTCCAGCATTCCGTCTTTCGGG GTTCCTCTGATTCAATCAACAAGGATATTTTTTTCCCATTTATTTGTTAAATGAATCTCATATTCTCTTGTCTTATCAAT AGGCTTGCATGACTCTTGTAATGGTTAGTTGTACCATCCACTCGGTAATATATAATATTGTCTTTATTGCTGTAGATTCG TGCAACTCCTGGTCATACTGCGGGTTGCATTACCTATGTTACAGGCGATACACCTGATCAACCTCAACCTAGGATGGCAT TCACGGGGGATGCCCTATTAATACGTGGATGTGGAAGGACAGACTTCCAGGTTCGTACTTTTGACCTGTTTTTGACTTTT TGATAGTTGCTCGTTCTCAAAGGCATTCAAATTTCAAAGATGTATCTAAACAAAGGATGTGTTACCTCTTTGTTGAATGA CATGGGGCTGTGTTTCTGACTTGATTATTTCTAATATCCTTTTGTAGTTATTTATTGGTATTTGATTCTCATTAATTATT ATGCAGGGTGGGAGTTCAGAACAGCTTTACAAATCAGTCCATTCACAGGCATGAACTTGACAAAAACTTAGAAGAATAGA CTAAGAACTTAAAGAGATGAGACATTCTTGAATATTAATAATTAATCACTTTCTCATGTTTGTTTTGTAAATAGATTTTT ACACTGCCCAAGGATACATTACTCTATCCGGCTCATGACTACAAAGGATTCACAGTAAGGAACCTTTAACTTTTTGCGTG CCAAATTAATATAGAGTTGCTTATACAAACAATGGTTTTAGGTTAGCACTGTTGGAGAGGAGCTGCAATATAATCCACGA CTGACAAAGGATGAGGTAATGTTTGACGATACCTATAATTTTTTAATTCAATCCTTTAATTTGAGCTTATAAATTATAAG AAAATACCCTTTTAGAATCCTAACGGGAGATCATACATATGATTGTGATTTGGAATGCTATAAGAAAATTCATTTTATAG CAAATATAATATTCGCATGGGAGCTAAGCTCTTGACAAAATGATAGACAGAACATTCTATTACCTCTGAATTGGTAGATA GAACTTGTTCCTATTGATGAGCAAGTCTTTCAACAGTACATGAACGTAAGAGTATTAAAAGAGTAATGGCTTTCGATTAC ATGTTTATCTATCAATATCCTTCATTCAGCTATATGCTTGAAGATGCTATTTGATCAAACATGTTCATGCAATGTGAAGA CTGGAGGAGAAATTTGATCCTAATCTTTTATTTCTGCAATGAGTTTTATTAAAAGTTGGACTTTTAGTTGTGATAAGAAA CTTCGGACTTATAACTACTCGGTAAAAAAAGGCTTTAAAATGTGGAAATTCCATTCATATTCTACTGCTGGTTAGCCCCG ACTCTTGTAGTCTCACAATTGAAAATGTTGGTTCCCCCTTTCCAGGAAACTTTCAAGAACATCATGGCAAGTAAGTGCTT GTTAATTTTTTTTTCTTTTTGCATAGATTGTCAAAAAGGTTGTTTGGCTTGGCCTTTTTTGCTATCGAGTTCTGGTAAAG ACAACTACTAATGACACATTTGATTTGTGCAACAGATCTTAGCCTGTCATATCCAAAAATGATCGACATAGCTGTCCCGG CCAATATGGTTTGCGGAATCCAATCCAAAACAAGCTGAGCCTTTATAAGCCATGCTGACACTACAGTCTCACAGTGATGT TATTCAACAAGAAAACCTTGCAAGTTAAGGAAAAAAGAACACTATAATTGCCCTTTGTGTTGAAGAGGAAAATCAAAATT GTATACATTACATTGATGATTGTGCAATTTAATTGGTCTTCGTATTGAAGAGAAAAAAAATCGTAAACAAATAATAAATT GATGATTGTGAATAGATGATTGCTAATACAATTAGACTCCAGTGATTATTCTGTGTTCTGTTATATTTTTGGTTATAGAT GTTGTAGCTTCTTACACGTTCAAGTCTACTTTTCAGAATTAACTAGTAAGAGCAGGATTTGGAAATGACTAGTTAAGTTG GAGGATCACAGTTACTTGAAGCAGGACCACATGGACTTAGTTATAAAATGAATGTTGTTAGAATGTAAATGTTTGTTTTT TCCCATCAGGCTTCAACTTTAGGGTAAGTTTCATTTTTGCTACTGAACTTAAAAATCAAAGATAATCAGTGCAGAAGTAT AATCATGAATCTAGTGCATCCTTGAATTACTGAGTAATAGTTGAGTCTCAAACATTTTCTGAACTAAAATAAGACCTCCA
CDS sequence (LotjaGi1g1v0022400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTGCGATTTCACTCTCTCAGATTCTCCTCTTCTCTCTTCGCTCCACCTTTACCTCTCTCCCCAGTTTCCATTTCCAT CACCAAACCCACCAGGCTCACACCACGAATGGCTTCTTACTCCACTTCCTCTTCTTCTTCCAAGCTCTTGTTCCGTCAGC TTTTCGAGAAGGAATCATCCACTTACACCTACCTACTCGCTGATGCTTCTCACCCTGAAAAACCAGCACTTTTGATTGAC CCGGTAGATAAGACAGTGGATAGAGACTTGTCCCTCATTCAACAACTGGGGTTGAAGCTTGTGTATGCCATGAACACACA TGTACATGCTGATCATGTCACTGGGACTGGCCTAATCAAGAGCAAAGTTCCTGTTGTAAAATCTGTTATTTCAAAAGCAA GTGGTGCGACCGCAGATCTTCATGTGGAGCAAGGCGATAAAGTCCATTTTGGTGATCTTTTTCTAGAGATTCGTGCAACT CCTGGTCATACTGCGGGTTGCATTACCTATGTTACAGGCGATACACCTGATCAACCTCAACCTAGGATGGCATTCACGGG GGATGCCCTATTAATACGTGGATGTGGAAGGACAGACTTCCAGGGTGGGAGTTCAGAACAGCTTTACAAATCAGTCCATT CACAGATTTTTACACTGCCCAAGGATACATTACTCTATCCGGCTCATGACTACAAAGGATTCACAGTTAGCACTGTTGGA GAGGAGCTGCAATATAATCCACGACTGACAAAGGATGAGGAAACTTTCAAGAACATCATGGCAAATCTTAGCCTGTCATA TCCAAAAATGATCGACATAGCTGTCCCGGCCAATATGGTTTGCGGAATCCAATCCAAAACAAGCTGA
Protein sequence (LotjaGi1g1v0022400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLRFHSLRFSSSLFAPPLPLSPVSISITKPTRLTPRMASYSTSSSSSKLLFRQLFEKESSTYTYLLADASHPEKPALLID PVDKTVDRDLSLIQQLGLKLVYAMNTHVHADHVTGTGLIKSKVPVVKSVISKASGATADLHVEQGDKVHFGDLFLEIRAT PGHTAGCITYVTGDTPDQPQPRMAFTGDALLIRGCGRTDFQGGSSEQLYKSVHSQIFTLPKDTLLYPAHDYKGFTVSTVG EELQYNPRLTKDEETFKNIMANLSLSYPKMIDIAVPANMVCGIQSKTS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 25 | 25 | - | – | |
| PANTHER | 1 | 286 | 286 | 1.4E-152 | – | |
| PANTHER | 1 | 286 | 286 | 1.4E-152 | – | |
| Phobius | 1 | 8 | 8 | - | – | |
| Phobius | 9 | 20 | 12 | - | – | |
| Phobius | 21 | 25 | 5 | - | – | |
| Phobius | 26 | 288 | 263 | - | – | |
| Gene3D | 47 | 283 | 237 | 1.9E-89 | ||
| CDD | 50 | 231 | 182 | 2.16375E-74 | – | |
| SUPERFAMILY | 58 | 270 | 213 | 1.27E-45 | ||
| Pfam | 60 | 229 | 170 | 1.7E-12 | ||
| SMART | 60 | 229 | 170 | 4.1E-22 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0022400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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