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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0022800 |
| Transcript ID | LotjaGi1g1v0022800.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cell division FtsZ-like protein; TAIR: AT5G55280.1 homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1; Swiss-Prot: sp|Q42545|FTSZ1_ARATH Cell division protein FtsZ homolog 1, chloroplastic; TrEMBL-Plants: tr|I3SGZ6|I3SGZ6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0022800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:2777486..2781558) extracted from Lotus japonicus Gifu genome v1.2.
AGTAAAGCTATCTATTTTCATTTTCCTAACCAAAAAGATAGAACCCTAACCATAGAGATAATAAATAAACCCTCTGGAGA AAGAACTTGGTAAGGGAAAAATGGCCACACTTCCTTCCCTCACAAACCCAAATGAGCTTCTCTCATCTTCCTCCTTCTAC CACAATGCATTATCCACTTCACCCTCTGTCTCTCTCAACACCACCAGAATTACCAGAGTCGCTAGCACCCCACAACGCCT CACTCGTCGTTTCCGGTCGGTTCGATGTTCCTTCGCCTCAGTAGAAAACGCCAAGATTAAGGTTGTCGGAATCGGAGGTG GTGGCAACAATGCCGTCAACCGCATGATTGGTAGTGGTTTGCAGGTGGGGTTCCAATTTGGGTAAACCCAGTTTGGGATT TCTTCAATTTTGTAGTACTGCTTTTGTGAATTCTATGTTGCTGTAGTAACTATGTTGTTGCTTGTGGAGACACTGTTGTT GTATTGTGGTTACACATGTTGGATATTGTGCTTGTTTACTCCAGCTGAACTATGCACTAGGCTAGTCTTTGTGTTTTGCT GCAACTATGGGAATAATGATGTTGAATTCTGCTACTTTTTCAATCAGGGTGTAGACTTTTATGCAATAAATACTGATGCT CAAGCGCTGGTACATTCTGTTGCTGAGAATCCTATTAAAATCGGAGAGCTTCTGACTCGCGGATTAGGTCAGGCACTCTC CTTGCGTGTCTCGTTGCCTTCGACGTGATTTATTTGTGTGGCATCACTCTAGTTTCCTTGCTAATAGCATGTTTAGTTCT GCCTATTTTTTCACCCCAGAAGCTACCTACTTAAGCTTCTGACCAGAATTGATTTTTCCTTAGAAGAATTTTTACACATG TATTTAGTTTAGTGAGATATTGGAGGGTGACCTTTGATTCAAATTGCTTGATAGAGATGCAGGTACTGGTGGGAATCCAC TTTTGGGAGAACAAGCTGCGGAGGAATCAAGAGAAGCTATTGCGGATGCCCTTAAAGGGTCAGATTTGGTGTTCATAACA GCTGGGATGGGTGGTGGCACAGGGTCTGGTGCTGCCCCAGTTGTGGCTCAAATATCAAAAGAGGCAGGTTACTTGACTGT AGGTGTGGTTACCTATCCCTTCAGTTTTGAAGGACGTAAGAGATCCTTGCAGGCAGGTGTCCTTTCTTTCCTTGTTTTTT TTAGTATTACTCTTTATATCATGTTGAAAAAAAGAATATTCATTCATATTTTTTTTCAGGCACTTGAAGCCATTGAAAAA CTGCAGAAAAATGTTGACACACTTATAGTGATTCCAAATGACCGTCTGCTTGACATAGCTGATGAGCAGATGCCCCTTCA GGATGCTTTCCGTCTTGCGGATGATGTCTTACGCCAAGGAGTACAGGGAATATCAGACATTATAACAGTTAGTTGCTTAG CAATCAATTTATTCATACCTTTTTCTTATCACTACAGTGCTATTAGAATTCCTAGTTGATCCTGCTAGATAGGTTACTTG CAAAAAGAAAAGAAAAACAAAACATGGGGTGCTTGAACCATTCTCCAACTCCTTTCTCGTTGATTCTTGAGTGGTCACTC TTCATAACAGGGCATGTATTTATATCAAGGGTTTATTCATGTAATTCTTTTAATCTTTTTTCTATATCATAAGAGCTGTT TGTGACTTATTCCAGATACCTGGACTTGTAAATGTGGATTTTGCTGATGTAAAAGCTGTGATGAAAGACTCTGGTACTGC AATGCTTGGAGTAGGTGTTTCCTCCGGTAAAAACCGAGCAGAAGAAGCAGCAGAACAGGCTACTTTGGCTCCTTTAATTG GATCATCTATTCAATCAGCCACTGGGGTAGTATATAACATAACTGGAGGAAAGGACATAACTCTGCAGGAAGTGAACAGG GTGTCTCAGGTACGTAAAGATTTTATCAGCACTTGCTTAAGGAACATACTGTTACATCTCTTCTTGTTTGTTTCAAACAT CTTATTTTTACTTTCCAAACTAGTCCTGTAATGTTACTGTTACTGGATTTAAATGTTTAAAACTTAAAGTAGAGTGCTGT AATATTTGATTGTGTTGATATTTTTGCATTCATTATACTATAATATGTTCAAAAAGTTGAAGTGTTCCTCAAGATTAAGA TTCAGTAAAATTTTAGCAAGCCATCCAAATCCTCCCCTGAAGAGAAGAAAAGGAATTTAGACTTAGCGGATGTATCACGT GAGGGGACTTGTTATCGTGAGAGATGAGAATAAGATTATACATATAATCCTGTTAATTGTCTTTTTTTTTCTCTCTCTTC AGTTTGTGCTTCATATCAATATATTATGGTTTTTCTTTTTGCTTTTGATGGATAATAAGCTAAGGCTACTTGTGGTTAGC ACTGGTTTTGCTTCTACATTTACTGCCCTTAACATGAGTAATTTTTATAGGTGGTGACTAGTTTGGCTGATCCTTCTGCC AACATTATATTTGGGGCTGTTGTTGATGATCGTTACACTGGGGAGATTCATGTTACCATCATTGCTACCGGCTTCTCGCA GTCTTTCCAGAAGAAGCTGCTAACAGATCCAAGGGCTGCAAAGCTGCTTGACAAAGTGGCTGAGAGCCAAGAAAGTAAGG CAATGCCCCCTCCTATCAAGTCCTCGGTAGAACCTAGAGCATCTCCACGGAAGCTCTTTTTTTAGTTGCTCAATTCTTTT ACCCTTTTAACTTTTCTAATTATCATATATTGCAGTCATTCAGCTGTGTAATGATCTTGAAGCTTGATTGATTTTTTGAG ATATCATTTACTCATGGTTTGTGTAACCATTCAGCTTAAGTGTATGTAGCTTAAACAATTTTTGTTCATGAAATGGATGT GTTTGTATTTATCTACTCTGCCCCAATGATTTCCACCAAGTAACACAATTAGCTTTGTCACATCATCATTTCTTACAACT TTACCTCAGTAACATATAACATTGCTGTTGTTTTGTGCAACATATAGCTAGAGCAATGTCTTAAACTCCAGCCAGTTACA ATACAAAGCCTTCCATTTTTTCCATGTACATACAAAGCCTTTCATTACACTACATATAAGAGTCAAACACACCATATAAA CACTTACACATGTCCATTACATTACAAACTCAACAAATTGCACGCCATTGACAAAGCACCAAGAGAAATCAGGAAACTAG GTTATGATGTTTCAGTGCATACATACAGAGACGTAGACAAAAACAGAAGCTTGACGAGTTAGGCATTTTATCATTACAGA TATTTGACCAACAGCCCAATGACAACAACCAAAACCACTATGCCAATCACTGATAAAAGCATGCACAAGCAGGAGCAACC ACCGTTGGTTCGTTTATTTAAAACTGCCAAGTTCTTCTGCACACGCTGTTTTCACAGAAACATAAACGATAAGCTGTTAG TTGGTACAAATGTCAACATTCAACAAATTAACATAATTTAACTTTGATAAAACTAAATAAGAGTATCGGTCCAGATAGAA GTTACTATAAGAATATTACCCTAAGCCGAGAATCTGTGACATCTACATGTTGGTCCAAGTCATCCTGGCAGATGAAAAGA AAGGATTCAATTTTACTAAGGAGGGTAGACCAGAAGAAAATAGCTGACACAAACAAGAACAAAGAAAAATTAATGCATGA AGAGAACATACAATGAGACTCGTGTGTAGATCCAGCTCTTCATTCACAGCTAATGCAATATGTTTTGTGCTTGTTACACT TTCCTCCAATTTCTCAAGGCCCTCATCTTGTTCTGTTTGAACAGCAATGTACTATAAGATCAAGGAACAGACTACAAGCA ACGTATTTTCAAACAATTCAATTAAATGACCTTTCATAATTTGTCGTTGAAGTCCAATAACTCCTTTGTTGTCCAGGCCA TTGGTCCTACTCATTGCATCTGGCTTTATTTCTGGCCCAAACAAACTATCCCTGTTGGAAAAATTTGGCATGCTCAACGT GGAAGCCATCTCGTTAACTCTTGATCTCAAACTTGCAAGCATGTCCTTGCGACGATTCAGCTCCTTCTCAGAT
CDS sequence (LotjaGi1g1v0022800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCACACTTCCTTCCCTCACAAACCCAAATGAGCTTCTCTCATCTTCCTCCTTCTACCACAATGCATTATCCACTTC ACCCTCTGTCTCTCTCAACACCACCAGAATTACCAGAGTCGCTAGCACCCCACAACGCCTCACTCGTCGTTTCCGGTCGG TTCGATGTTCCTTCGCCTCAGTAGAAAACGCCAAGATTAAGGTTGTCGGAATCGGAGGTGGTGGCAACAATGCCGTCAAC CGCATGATTGGTAGTGGTTTGCAGGGTGTAGACTTTTATGCAATAAATACTGATGCTCAAGCGCTGGTACATTCTGTTGC TGAGAATCCTATTAAAATCGGAGAGCTTCTGACTCGCGGATTAGGTACTGGTGGGAATCCACTTTTGGGAGAACAAGCTG CGGAGGAATCAAGAGAAGCTATTGCGGATGCCCTTAAAGGGTCAGATTTGGTGTTCATAACAGCTGGGATGGGTGGTGGC ACAGGGTCTGGTGCTGCCCCAGTTGTGGCTCAAATATCAAAAGAGGCAGGTTACTTGACTGTAGGTGTGGTTACCTATCC CTTCAGTTTTGAAGGACGTAAGAGATCCTTGCAGGCAGGTGTCCTTTCTTTCCTTGTTTTTTTTAGTATTACTCTTTATA TCATGTTGAAAAAAAGAATATTCATTCATATTTTTTTTCAGGCACTTGAAGCCATTGAAAAACTGCAGAAAAATGTTGAC ACACTTATAGTGATTCCAAATGACCGTCTGCTTGACATAGCTGATGAGCAGATGCCCCTTCAGGATGCTTTCCGTCTTGC GGATGATGTCTTACGCCAAGGAGTACAGGGAATATCAGACATTATAACAATACCTGGACTTGTAAATGTGGATTTTGCTG ATGTAAAAGCTGTGATGAAAGACTCTGGTACTGCAATGCTTGGAGTAGGTGTTTCCTCCGGTAAAAACCGAGCAGAAGAA GCAGCAGAACAGGCTACTTTGGCTCCTTTAATTGGATCATCTATTCAATCAGCCACTGGGGTAGTATATAACATAACTGG AGGAAAGGACATAACTCTGCAGGAAGTGAACAGGGTGTCTCAGGTGGTGACTAGTTTGGCTGATCCTTCTGCCAACATTA TATTTGGGGCTGTTGTTGATGATCGTTACACTGGGGAGATTCATGTTACCATCATTGCTACCGGCTTCTCGCAGTCTTTC CAGAAGAAGCTGCTAACAGATCCAAGGGCTGCAAAGCTGCTTGACAAAGTGGCTGAGAGCCAAGAAAGTAAGGCAATGCC CCCTCCTATCAAGTCCTCGGTAGAACCTAGAGCATCTCCACGGAAGCTCTTTTTTTAG
Protein sequence (LotjaGi1g1v0022800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATLPSLTNPNELLSSSSFYHNALSTSPSVSLNTTRITRVASTPQRLTRRFRSVRCSFASVENAKIKVVGIGGGGNNAVN RMIGSGLQGVDFYAINTDAQALVHSVAENPIKIGELLTRGLGTGGNPLLGEQAAEESREAIADALKGSDLVFITAGMGGG TGSGAAPVVAQISKEAGYLTVGVVTYPFSFEGRKRSLQAGVLSFLVFFSITLYIMLKKRIFIHIFFQALEAIEKLQKNVD TLIVIPNDRLLDIADEQMPLQDAFRLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSGKNRAEE AAEQATLAPLIGSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYTGEIHVTIIATGFSQSF QKKLLTDPRAAKLLDKVAESQESKAMPPPIKSSVEPRASPRKLFF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 196 | 196 | - | – | |
| PANTHER | 6 | 199 | 194 | 3.3E-251 | – | |
| PANTHER | 6 | 199 | 194 | 3.3E-251 | – | |
| Hamap | 61 | 439 | 379 | 35.545 | ||
| Gene3D | 62 | 397 | 336 | 1.4E-113 | ||
| SUPERFAMILY | 64 | 289 | 226 | 6.6E-62 | ||
| SMART | 65 | 286 | 222 | 7.6E-96 | ||
| Pfam | 65 | 198 | 134 | 2.5E-29 | ||
| CDD | 78 | 395 | 318 | 3.21625E-146 | ||
| ProSitePatterns | 96 | 130 | 35 | - | ||
| ProSitePatterns | 149 | 170 | 22 | - | ||
| PRINTS | 150 | 170 | 21 | 1.2E-22 | ||
| ProSitePatterns | 158 | 164 | 7 | - | ||
| PRINTS | 178 | 199 | 22 | 1.2E-22 | ||
| Phobius | 197 | 216 | 20 | - | – | |
| TMHMM | 197 | 216 | 20 | - | – | |
| Phobius | 217 | 445 | 229 | - | – | |
| PANTHER | 226 | 445 | 220 | 3.3E-251 | – | |
| PANTHER | 226 | 445 | 220 | 3.3E-251 | – | |
| SUPERFAMILY | 288 | 404 | 117 | 1.33E-39 | ||
| SMART | 288 | 405 | 118 | 4.6E-44 | ||
| Pfam | 303 | 396 | 94 | 5.7E-30 | ||
| MobiDBLite | 418 | 445 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. | ||
| Cellular component | Microtubule | Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle. | ||
| Biological process | Microtubule-based process | Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins. |
Expression pattern of LotjaGi1g1v0022800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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