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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0031600 |
| Transcript ID | LotjaGi1g1v0031600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT1G27180.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|F4JNB7|RPP5_ARATH Disease resistance protein RPP5; TrEMBL-Plants: tr|A0A0R4J566|A0A0R4J566_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0031600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:4047589..4056260) extracted from Lotus japonicus Gifu genome v1.2.
AGTTAATGAAGGATTAGGTTAAAACAATAATTATAATAACATTTAGGTTTAATCCTTTCCCTCTTCCTCCCCTCCTCCAC TAGATGCAATCTCCTTCAGTATAGCACTGGCAAAAACCTTTCTGGGTGAAAGACTCGCAAAACTTCAGTATCAAATCCAT CAATTGGGTCAATATCATTTTCACAGGTCAATGCAAACTATAATCCACATTAAAACAGAAACTAAGCATCCAACAATTCC ATAAGACATGATAAACTATCGCATAACATCAATATCCCTTAAGATTATAAAATGTAACAAAACAAAACCAACAATATCTG ATGTATACAAACAACTGCAAAATGGGTAAAACAATAAGACTCAAAAACTAAGCAGTAAGAACAACAGCACCACCAACTTC CTTGATCTTCGTCTCAGCGATCTTGTAGACAAGCTTGGCCTTAACAACAAGAGGCTTGTTGGAAGGAACACACCCTTGCC ACCACTCACAGCAAAAAACTGATTCTTCTACCTCTCCCTCTCCTTCCAGATCTGGGTTTCTCTTTCGTTTCTCCTTCTAC AATCAATAAAAAATAAATACAAGAACAAAGGAGGATGGAGAGAACCCATGGAATTTTTAGCCTCCAAAGGTGCTTCTACT CACGACATAGTAACCAGGGACTCGAAAAGTTCCAGATCTGAACCCATAAAAAAATTCCAGATCTTAACCCACTGACAAAT GCAAGAAGTTGAATGGAGGAGGAGGAGGAGGATGGTGAAGTTGGGTTTCAGATCTGGTGCTTGTGGTGGTGGTTGGTCCT CCTCTCTTCAGATCTAGAGCTTGTGGCGGCGCGAGAGAGGAGCAGCGGATCGGAACTCGTGATCTGCCTCCTTCACCGTC ACCAGCCACCGTCGCCGAACCCCCACCACAGATCGACCCATCTACCACCTTCGCCAAACTTCCATGTCTCGTTGACAACC TCCTGCGTGACCAGGGAGAGAGAGGGGAGATGGTGGTGCGTGATTCCGGGTGAGGAAAGGAGATGGCGTGGGTTCAGGGA AGAGGAGATAGTGGTGGCGGCGTAGCCATGGGAGAGGAGGAGGAGGAGGTGGCGGCTATAGCAGAAGAGGAGAAACTCAA AGCCATGTTTCTGGATTTTTTGCATTTGAAGTTTTCTGGAGTTGAAGTTGAAGTTGTGGATTAATTAAGAATAAATATTT TTTTTGAAATTAATTAAAAATAAATCTTTAATTAAGAAAATATGTTTTTTGATTTTTTTTTTAAAACCTGCTATAGTGGG TCAAAAGGCCAATGTGCAACCATACACAACTATTAAATTTTTCCTGGTAATTAGTAATTACATACAGAGAGAAAGCGCTA GGCTGCTAGTTTTGTTGTTAAATATTTAATAGTTTTGAATTGATAAAACCAAGGTGAGATCAGATCTCTTAGATTTTTTC CTTCCTTCCTTCCTTCCTGCAGCTACGCTCTGCTTCGATCTGCTGTTCACCATGTCGAGTCAAGGGGCACAACATGCCAC TCACAACTCCTGGAGAACCAACTACTGCGATGTATTTGTCAGTTTTCGTGGCCTAGATAGCCGCAGTTTCATGAGGAAGC TCTGTAAGGCTTTGCTGGAGAAGAAAATCAATGTCTTCTGTGATTGGGGACTGGAGAAAGGCAAAACTCTGCATGATCAG TTGTTTCATGCGATTCGAGAGTCACGAGTATATGTTGTTGTCCTCTCTGAGAACTATGCATCATCCAGCTGGTGTCTTGA TGAACTTGCTAAGATCATGGAGGGTGTAGAGTCCACCAATAAGGATAATCGCAAGCTCTGCCCGGTGTTTTACAAGGTAC AACAGTCTGATATTGTGGAGAAGCTCTGCGATGGCAAACAAATGGCTGAACTTGCAAAAAGGTTTGAGAGACTGCAGATA TGGAAATCAGCGTTGACTCAAATTGCTCATCTACCCGGATGGACTTGGAGTGAGAGGTACTTGTGTTTGGATTTCCTGTT ATTGCTAAGTTAAAATCATTTAGTTACTAATAAATTTAATTAAAAATGAATTAATTTATTAATGGTGAAAATATGTAATT TAATCATATAAAATAATTGAATTATAATTATCACTTGCTACTACTTAGTTAACATTATTTTTTATTTAAATTATAATAAA AATAAATAAAATTATTATTCATTAACAATGAAATAGACTACTCACTTATAAATATTGATAAATAACTAAATATAGACTAT TTTATATAATCAGTTGTTATTATTTAAAATTATTTCTCTACTTATATAATAATTTATAATTTAAATATAAAATAATTTTG AAAATAATAATTTTAATAATATTTTAAAGTTTAATTATTGTTTATTTTTTTATCACTTGCCACTACTAAGTTAAATATAT AACTTTTATGTTTCATTAAAATAGGCTCTCTTAATGAAAAAGATTAAAATAGGATAATTAATAAAAACCAATAAAATTTT AATTATTTTTAAAACATAGGCTCATTTCTAAAAATATAAAAATAAATAAATATAATAGAATAATCACTTTTTAGAAAATG TAAATTTAGAAAATTAATTTCTAAAAGTTTATCTCGTTTTTTTATTCAAAGGAAAATTTGATATATTTTTTTACGGTCTA TATCATATTCTATCATTATTCTTTCTACCTCAAACACATGATAAGATAATAGTCTATTATGATATTACCATATCCTGCCT TTATCCAACACTTTATCTTATTTTGCTCTTATCCTATTTTGACCACCAAACGAACCATAAATGTTATGTGAATTGTTATT CAGACCCCCCCGATAGCTATTTGAACCCTGTTAAATTCGTAAAATCCGAAAAAGTCCTTTCTAAATTTTTTTCGCTCGCA CTTTCACAGTGCGAGCGGAACACACATATTTCTTTCTTTTTTTCTTGTTTAATTTCTAGAAGGAATTTGAGACTGAAACT TCTTAGTTAAGATAACAGGACCATTCTAAACTCAAATATGCAGTCAGAATCTCCAAAATCCTACACATTCTAGTAGTCGC TTCACAATCAGGATGGGTGCGATTTGGAAAAGTTGATAGTTTTTAGTGTCGGATGCTCAGGCGACCAACTGCAAAGTTGA AAAGAAAAATCAAACGATCATACCTTAGCACCTTCTTTCCTAAGATTTGTGTAATTTAGCCAAATTCCTTCATTTGGTAT TTTATTTTGAATTTCAAATTTTTTTATTCCACCATAAATTTCCAAATATTCTATCTTGATTTACTGTGGAGTCTCATAAT TTTTTAAAATCATCTGATATCAGTTATGTATAAATTTGCAGCAATTCTCTCTTTAAAAGTGCGTTCACTTCGCACTTTTA AAGTGCGTGAGTGACGCACTTTAACCGTGTGTGCGTGCGTGCGTAACGCACTTCTAAAGTGCGCTTATTTGCAGAATAAA ATTAAAAACGACAGAAACAACTCCCTACAGTTGGAAGTTTTCAAAAACGATAGAAGATTGAGGTTGTGGTAGTGGTGGTA GCAGCGGTGGTGGTTGTGGCGGCGGTGGTGGCCGCGACAGTGATGACGGTAGCGGTGGGGGCGGTGGTGGTGGTGGGTGG AAGAAAGAGGAAAGAGGTAAGGAGAGAGGAAAGAGGAGAGGGAATGTGAGGATGGTGAGGATTTTTTTATATTTTTTTTT TCATTAAGGGTATTTTAGTATTTTTGCACTTTTTCAGAGGTCCAAATAGCTATCGGAGGGGTCTGAATAACAATTACCAA ATGTTATTTTAAACTGAAAACTAAACCTGCACAATTTAAATTTCAAGTACTTCATTTTATCTAATAGTTCCATAACTAAT GTCTAGTAGTTGAAGTCCAACCACGGGCGGAGGGAGGGGTGACCTAATCCTTGTATTTCTTTTGCTAAATTATGTAATGG CCCCATGAACATATAACACAAAAGCATGAGTGATAATGGAATAAGAAGCAAAAATATGAGCAACATATAATTTATTGTCG GTTATCTCTTATGTTAGATGTTGCATATATATATTTTTTTGGGTCATTACAACACTTATTTTAACGCTCTCTTTCTAACG CCATTTTATTGACTAGTTGAAATTTATGTTTGTTTCACTGTCATATTATTTGTGGACTCTACAAGAATTTTAATCGATGA ATGATAGAGTATTGAAAATATAATGTTAAAGTGAATGTTTGCTATATTTATTGCAAATATAATCGTTGTATTTCAGTTTT GTTCTCATATTAGAAATGTGCAAATTTTAAATTTTCTTATAAATCATATATCATAGATCTTGGCCGCATTTTTACCAAAA TCCTGGCTCCGCCCGTGTGCAGCTAGAAATATTGTGATATTGTTGTATAGCAGTATATGTTAGTTGTGTTGAAGGATTTT TTTCCAGGATACATAGTTTTGCAGTCACAATTTGTTTTTGAGTTATAATATACTTGCACTTCACCTTTTTTACAATTCAT TTCTACTTTGTTTTCATTTTGTCTCTCTCTTCTGTTTTCATCACATCATATATCATATCATTCATTTATCTCTCTTCTGT TTCTATATTTCTCTACAAAGTGTAAGGTGGAGAGCTGTGATGAAAAGATAATTATTTGTTTTTGTGCAAATAGTTTGATT AATTGGTCATTTGTATGTTTTCTTGAAGTAATATTAATTTTGAATACATATACCTAATGACATGAAAATTGTGCTTTCAT AGGAAGGAAAGTATGATCATCCAACACATGGCAGAATTGATCCACGAATCCTTGGTAGGGTTCGATGTTTTTATCAGTTT TAGAAACCCAGATACGGGTTACAACTTTACAGGTAATCTCTACAATGCTTTGCGACAGAAGAAGATCAACACTTGTTTCG TGGATCATGAGCTCTTGAAGAAGATGCATGGGGAGGACGAGCCCAAATTTTCACCGTATGTTATTAAAGCAATTAATGAA TCAAGGATTTCAATAGTTGTTATGTCCGAAAACTATATCTCTTCCACACTCTGCCTTGAAGAACTTGATAACATAATTGA ATGCATGAAGACTAATAAGCAGTTGGTTTGGCCAATATTTTACAAAGTAGATCCATCACATGTGAGGAAACAAACAGGCA AACAGCACATGTTGGAGCTGCCCTAGCTGCTCATGGAAACAACTCTGAAAATGGCCCTATGAAGATGTTAAAATGGAAAT CATCTTTGACTGAAGTGGCTAACTTGACTGGATGGCCTATCGAAACTGGGTATGTATATGTCAAGCAACCAATTATCTAA AAAACTTAAGCTATTGAATAAATATTTCATGAATGGTTTTATATATATTATTTCTCTAACACGCTCACTCAAGCAAGAGT CATTTCATTTAAAAGTCATGAAGTCTCAGCCTTTGCTGAGAGCCTATGACCCAACTCTCAACTTGGAATGGGCATGCCAG CATGGTGCAGCTACCGGGCCAACCCAGCAAAGCCAAAGCCATGTCCCAACACCTTGGTGCCCCCCACTTGGGTCACAAGC TAGCGTTACCAGCTCGACATTCGGCTCTTACCCAACAACTTAAGTTTTTGGAATAATTAATTTTTTGACGGTATATATGT GATAATATATATATATATACACACACACAATTTTAATATTGATAGATTTGCGCTCCATGATCCACTTGTGCTTAATTTCA CAGGTATCTACTACTTCTTAATCTTCCACAACTGTAGCTAAATAACCGCCAATTACACATCGACACGTGTCCTGCTTTTA CTTACTTTTTTTTCCTTGATCGATAGGGCCAGAACGACGTCGTTCTCCATTCATCTCTGTTCTCATGAACCCTAAGCTGG CAATCACGTGTTTGCTCTCCCCTTCTACCCACTCCATCGTACCATTCATCATCTTCCGTTTCTCTTCCGCCTCCATTCGT GCATAACTTTTCTTTGATTTGTCTCTTCTACGGCAGTACCAACGTCACATATATCACGCGTTCCAGCCAAGATCGACGTC ACCCTGACCAGAAGATCTGCTTTCCACGATCTGCGGCTTCTTCTCATGGCTTCTCCGGTGATGGCTTTCACGTCAACCCT TCAACCATTTCGTGGGTAAGCTTCGGAACAGTTCTCCATTGATCTTGAACTCACTGTAGCTTAGCACATCTCTTACGTTT CTTCCTGATTTCGTCCTTTATTTGAATTTTTTATCTGATAGTTTTGATTAGATTGAGGGATTTGGTACTTGCTTTGCAAC CATTACCTATGGTTAGATTGGGTTCATTAGTTACTCATGCATCTGTTATTTCCATTCTGATATGCATCTGTCATTTCCAC TCTGATTTGAAGTTGGGATTAGGTTTTTAGGTCTAGGGTTATAGGTGGATTGCACAACCTATTCTCCTTTGAATTTTTTA TCAGATCCCCTTGCCTATAAATTCTCACACAACCCTCACTCCAGCACCATTTCCATTGTGTGTGTTAGTTAGTAATTTAG CATTTCTATCTGGTGTGTGTTAGTAACTTAGCAGTTCAAGTCACAGTAGTACAACTCAAACCATATGTTTAATTGTTCTA ACCTTTTCTTTGTATGTCTTTTACAGCTGGGACAGAATTGCAGAGAAACTGAGTTTCATGTTGGTCTTTGGAGATTTAGT GTGGATTGGTATGACTCAATGCAGGAAGAGAACTGTTCAAAAAATGTGGAAGTCTGTGATACATGGCAAGTCCTTGCAGG TTAGGTTTCTGTATTTTGAAGATTTACTATTATTTCTAAAATTTTGGTTTTGTTCTAAAGCTATATATGTTTTTCAATGG CAAGTCCTTGGCAGGTATTGTTTTTCAATGCAGACGCTTAAGGATGATTGAGGGGAGCTCAAAGTTGCAAAGCCCTCTCT AAGTCCTTCTCTCCCTTGATTTCCTTCTATATGTATATATGTTATCCCAGAAGATTTCTTATAACTGGTGCATGTATTTA TGTAAACTCATACTCACAACATCTTTGGAAGAAAATGATTGTGAATATAACCTGAAGGAAACCAATTCAATGATTTGAAA GGCTTTAGTTAAATTACTTAATTTCAAAGCTGGGACATAGAAATATATAGGGAATGTTTAACATTGGCATGGTATAGCAT TGGCAGATTCACTTACATGTTAGTAATACAATTTTCTTATGATGCAAAAGTCTGTTTCTATTTGCTTCAAATAATTACAA ATGTTTTAGACATTATAGAGAAATGTCTAGGGGTGTAAGAGGGCTTATCTTCTTTTGAAACTCTCTTTAGCTTCAAGCAT AGGTTCTTACAATTTTGTGCTACTTCAATTTCTCTGTTCTTGAGGAGTATTGGTACATGGGCACATGAACTTATCAAGAG AAAAGAAAAAGGGGATTGGAGTAGGGGATGCTTCTATTCTGTATCTTCTGGCTTCTAACTCTTCATTGTATGAGCTAGCC TTGAATTTATCTTTGTTTCAAATGGATTGTTCCCTTGGTGAAGGTAGAAGATTTTGAAGCCTTTGTGGAGAGTGAGCAAT CACTCTATGACCGTCTCTTGGTGAAGTAGTTTTAGCTACAGCAACAATATTTGAACAATCATCTACTTCACCAACTGAGT CATGAGAGTAGTTTTAGCTATAGCAGACTTTTTCTTTACTATAGGTAAGGGGGATGTCAAAAGAGTTGTGTTTTATGAGA GTAGTTTTTGAAACAGATTGCAAGTTAGTGGAAAAATAACTCCTATTTCTATATTTTATACTAACCTATCACTTCTTTCT TTCTGAGTCGTGGACAGCTATTGATTGCTTACATCTATTACATAGTCTCTATATTATTGTTTAGTTATGGTCTACCAATA AAATAGCATGAATTTAAAGCTTGATATTGTTTTTTTCTCTCTTGGCCCCTTTATTTTTATTCTATAGCCTCTTTATTTCT AATTTTGAAGAGATGAGTTCTGATCTGTTGCTGAGAAATTCTCTGATGGTTTTATGTTTTATTGTGCAAGACAATAAAGA GAAAATAGCGAATTCATCAAAAGTTTAAAGTGCTGTCACGGAGCAACTGAACGTTGTAGTTTTAGTTTTTTATAGTCAAT GTCAATCCTCAGACAGTTTGTTTCTAATTAGTGACTTCTATTATGTTCATTGGTGGATGCATGCAATCGTTCTACTCATC CTAGAGGAGGACTTTTATGTAATTCAAGGTTAAGATGAACATTTGTAATGGAGATGTGGATCAAGTTATCTAAGGGGGGC ATGCAATATCAAATTCCAATTGTCATTGTTAGTAACAGATTCAAGTGTTTTTATTTTTAAAAAATATATAAGTAGTCTTT ACTGAGATGTTTAGCATTTTTATGTGACATGGTTTTTTTGTTAGTATTATTCACTATAGCCTTTAAATAGGCTAATAACG GCTGGGAGGTTACAAAGTTTTTTTTTTTAAAGGGAAAGGGAGGTTACAAAGTTAAAACAGATAAAACATCCTAACTTTCT CCTAAAGTTTAGGCTATGTGCTAAATCATACAACTGACCACTTACACATGACAAAGACTAAAACAATAAAATAAAACTGA TAAATAATTATCTAACATTTTTCACACCTCAATAATATTTACACTTTATATTTCTCTCTTCTTTTCTCATGACAATTCTC ATTTCTCTTTCTTTTTCATTCTTACTTACAAT
CDS sequence (LotjaGi1g1v0031600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGAGTCAAGGGGCACAACATGCCACTCACAACTCCTGGAGAACCAACTACTGCGATGTATTTGTCAGTTTTCGTGG CCTAGATAGCCGCAGTTTCATGAGGAAGCTCTGTAAGGCTTTGCTGGAGAAGAAAATCAATGTCTTCTGTGATTGGGGAC TGGAGAAAGGCAAAACTCTGCATGATCAGTTGTTTCATGCGATTCGAGAGTCACGAGTATATGTTGTTGTCCTCTCTGAG AACTATGCATCATCCAGCTGGTGTCTTGATGAACTTGCTAAGATCATGGAGGGTGTAGAGTCCACCAATAAGGATAATCG CAAGCTCTGCCCGGTGTTTTACAAGGTACAACAGTCTGATATTGTGGAGAAGCTCTGCGATGGCAAACAAATGGCTGAAC TTGCAAAAAGGTTTGAGAGACTGCAGATATGGAAATCAGCGTTGACTCAAATTGCTCATCTACCCGGATGGACTTGGAGT GAGAGGAAGGAAAGTATGATCATCCAACACATGGCAGAATTGATCCACGAATCCTTGGTAGGGTTCGATGTTTTTATCAG TTTTAGAAACCCAGATACGGGTTACAACTTTACAGGTAATCTCTACAATGCTTTGCGACAGAAGAAGATCAACACTTGTT TCGTGGATCATGAGCTCTTGAAGAAGATGCATGGGGAGGACGAGCCCAAATTTTCACCGTATGTTATTAAAGCAATTAAT GAATCAAGGATTTCAATAGTTGTTATGTCCGAAAACTATATCTCTTCCACACTCTGCCTTGAAGAACTTGATAACATAAT TGAATGCATGAAGACTAATAAGCAGTTGGTTTGGCCAATATTTTACAAAGTAGATCCATCACATGTGAGGAAACAAACAG GCAAACAGCACATGTTGGAGCTGCCCTAG
Protein sequence (LotjaGi1g1v0031600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSQGAQHATHNSWRTNYCDVFVSFRGLDSRSFMRKLCKALLEKKINVFCDWGLEKGKTLHDQLFHAIRESRVYVVVLSE NYASSSWCLDELAKIMEGVESTNKDNRKLCPVFYKVQQSDIVEKLCDGKQMAELAKRFERLQIWKSALTQIAHLPGWTWS ERKESMIIQHMAELIHESLVGFDVFISFRNPDTGYNFTGNLYNALRQKKINTCFVDHELLKKMHGEDEPKFSPYVIKAIN ESRISIVVMSENYISSTLCLEELDNIIECMKTNKQLVWPIFYKVDPSHVRKQTGKQHMLELP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 10 | 173 | 164 | 1.0E-85 | – | |
| Gene3D | 14 | 181 | 168 | 1.7E-43 | ||
| SUPERFAMILY | 15 | 157 | 143 | 3.4E-29 | ||
| ProSiteProfiles | 17 | 169 | 153 | 20.719 | ||
| SMART | 18 | 154 | 137 | 3.6E-21 | ||
| Pfam | 20 | 175 | 156 | 1.5E-26 | ||
| ProSiteProfiles | 180 | 295 | 116 | 18.637 | ||
| PANTHER | 181 | 295 | 115 | 1.0E-85 | – | |
| SMART | 181 | 301 | 121 | 2.7E-16 | ||
| SUPERFAMILY | 182 | 296 | 115 | 1.02E-26 | ||
| Gene3D | 182 | 299 | 118 | 4.2E-40 | ||
| Pfam | 182 | 295 | 114 | 5.6E-28 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. |
Expression pattern of LotjaGi1g1v0031600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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