Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi1g1v0032700.2

Overview

Field Value
Gene ID LotjaGi1g1v0032700
Transcript ID LotjaGi1g1v0032700.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Purple acid phosphatase; TAIR: AT3G20500.1 purple acid phosphatase 18; Swiss-Prot: sp|Q9LJU7|PPA18_ARATH Purple acid phosphatase 18; TrEMBL-Plants: tr|I3SLH6|I3SLH6_LOTJA Purple acid phosphatase; Found in the gene: LotjaGi1g1v0032700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:4177837..4179779) extracted from Lotus japonicus Gifu genome v1.2.

TGTTCAAAAGTAGTTTCTATTCTTGAACTGTGAACCATGCTTCCTTTACTAAGCAAATGAAATAGCCAATAATATCATAT CAACCTCTTTATGCTTGTTTTATTTGTGGTACCAACTCAGATTCTTAGAAGCATAAATGTATATTCCAGGTACATATTTC TCTGGCAGGAGACAAGCACATGAGAATTACATGGATTACTGATGATAAGCACAATTCACCTTCATTTGTACAATATGGAA TATTACCTGGGAAATATGACTCAATTGCTGAAGGAGAGTCCACCTCTTATAACTATCTGTTATATAGCTCAGGGAAAATA CACCATACTGTAATTGGGCCTTTGGAAGACAACACTGTGTATTTCTACAGGTGTGGTGGGCAAGGTCATGAGTTTCAGCT TAAAACTCCTCCGGCTCAATTTCCGATCACTTTTGCCGTGGCCGGGGATCTAGGTCAAACCGGTTGGACTGAATCGACAT TGGATCATATCGACCGATGTAAATATGATGTATACCTGCTTCCGGGAGATCTTTCATATGCTGATTGTATGCAGCATCTA TGGGACACGTTTGGTAAGCTAGTGGAGCCACTTGCTAGTACAAGGCCATGGATGGTCACAGAAGGAAATCATGAAGAGGA GAGCATGTTATCGTTGATGGATGGGTTTGTTTCCTATAATTCAAGATGGAAAATGCCATTTGAGGAAAGTGGATCAACTT CAAATCTCTATTACTCTTTTGAAGTTGCGGGTGTCCATGTTATCATGCTTGGCTCTTATGCAGATTATGATGTTTACTCA GAACAATATAGATGGCTAAAGGTCAGTTGATTTGATTCCTATTTGACCAGTAGTTACTATACTTGGATGTGTGCAATAGA ATCCATAGTCAGCCATGTGGTTGGACTAGATAATATATAAAGGGCAGCTCGGGATTCAGGGTCCCCGACCACTTGGTCTA TTTTACGCAGTCTTACCATGTTTTTTACACAAGAGGTTGTTTCCAGGACTTGAACCAGTGAACTCAATCACATGGCAACA ACTTTTTACCGTTGTGTCATGGCTCCCCTTCAGACTAGATAATAAATTCTGAAAAGAAATCCTCTTTTTCCATTTATTAT TGTTATTATTATATTAGTGTTATTTGTCTCTTTTTTCTCTTTTTAAATTTTTGTTCATCCCTCATCTGCAGGAAGATTTG TCAAAGGTGGACAGGAAAAAGACACCCTGGCTGCTTGTGTTGTTTCATGTGCCATGGTATAATAGCAACAAGGCTCATCA AGGTGCTGGGGATGATATGATGGCAGCCATGGAGCCATTGCTTTATGCTGCTGGTGTTGATTTAGTTATTGCTGGTCATG TTCATGCTTATGAACGTTCGGTACGCCTTCATGGTTTGGCATTTATTTTCTTCGTGAGCGTGATTTAATGGAAATTGGAT CTTAAGTGGTACCTTGTCTGATTGACAGAAACGTGTGTATAATGGAAGACTAGATCCCTGTGGTCCAGTACATATAACTA TTGGGGATGGAGGAAACAGAGAAGGCTTAGCTCATAGGTAAGTTCACTGCCAGAAAACATACCATAGAAATATGTTCTCT GAATTGCTTGTTATGTGAGAAAAGCTATTTTGAGGTTGTTCATCAGCATGAATGTGGCCTGAAATCTCTTTGTTCTTTTT CATTGTTGCTAGATGTGTACTTACATCATTTATTAATTGATAGGTATATAAATCCCCAGCCAAAGTGGTCAGAATTCCGT GAAGCGAGTTTTGGTCATGGTGAGCTGAGGATTGTAAATTCCACTCATGCCTTCTGGAGTTGGCACAGGAACGATGATGA CCAGTCAGTACAAGCTGATGATATCTGGATAACCTCTTTGGTCAGCTCAGGATGTGTTAATCAGAAGAGTCATGAACTCA GGAGTATGCTCATGAAACCCTAA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0032700.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAGAATTACATGGATTACTGATGATAAGCACAATTCACCTTCATTTGTACAATATGGAATATTACCTGGGAAATATGA CTCAATTGCTGAAGGAGAGTCCACCTCTTATAACTATCTGTTATATAGCTCAGGGAAAATACACCATACTGTAATTGGGC CTTTGGAAGACAACACTGTGTATTTCTACAGGTGTGGTGGGCAAGGTCATGAGTTTCAGCTTAAAACTCCTCCGGCTCAA TTTCCGATCACTTTTGCCGTGGCCGGGGATCTAGGTCAAACCGGTTGGACTGAATCGACATTGGATCATATCGACCGATG TAAATATGATGTATACCTGCTTCCGGGAGATCTTTCATATGCTGATTGTATGCAGCATCTATGGGACACGTTTGGTAAGC TAGTGGAGCCACTTGCTAGTACAAGGCCATGGATGGTCACAGAAGGAAATCATGAAGAGGAGAGCATGTTATCGTTGATG GATGGGTTTGTTTCCTATAATTCAAGATGGAAAATGCCATTTGAGGAAAGTGGATCAACTTCAAATCTCTATTACTCTTT TGAAGTTGCGGGTGTCCATGTTATCATGCTTGGCTCTTATGCAGATTATGATGTTTACTCAGAACAATATAGATGGCTAA AGGAAGATTTGTCAAAGGTGGACAGGAAAAAGACACCCTGGCTGCTTGTGTTGTTTCATGTGCCATGGTATAATAGCAAC AAGGCTCATCAAGGTGCTGGGGATGATATGATGGCAGCCATGGAGCCATTGCTTTATGCTGCTGGTGTTGATTTAGTTAT TGCTGGTCATGTTCATGCTTATGAACGTTCGAAACGTGTGTATAATGGAAGACTAGATCCCTGTGGTCCAGTACATATAA CTATTGGGGATGGAGGAAACAGAGAAGGCTTAGCTCATAGGTATATAAATCCCCAGCCAAAGTGGTCAGAATTCCGTGAA GCGAGTTTTGGTCATGGTGAGCTGAGGATTGTAAATTCCACTCATGCCTTCTGGAGTTGGCACAGGAACGATGATGACCA GTCAGTACAAGCTGATGATATCTGGATAACCTCTTTGGTCAGCTCAGGATGTGTTAATCAGAAGAGTCATGAACTCAGGA GTATGCTCATGAAACCCTAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0032700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MRITWITDDKHNSPSFVQYGILPGKYDSIAEGESTSYNYLLYSSGKIHHTVIGPLEDNTVYFYRCGGQGHEFQLKTPPAQ FPITFAVAGDLGQTGWTESTLDHIDRCKYDVYLLPGDLSYADCMQHLWDTFGKLVEPLASTRPWMVTEGNHEEESMLSLM DGFVSYNSRWKMPFEESGSTSNLYYSFEVAGVHVIMLGSYADYDVYSEQYRWLKEDLSKVDRKKTPWLLVLFHVPWYNSN KAHQGAGDDMMAAMEPLLYAAGVDLVIAGHVHAYERSKRVYNGRLDPCGPVHITIGDGGNREGLAHRYINPQPKWSEFRE ASFGHGELRIVNSTHAFWSWHRNDDDQSVQADDIWITSLVSSGCVNQKSHELRSMLMKP
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Pfam
PF16656
1 70 70 1.7E-13
IPR015914
PANTHER
PTHR22953:SF123
1 372 372 5.8E-253 –
PANTHER
PTHR22953
1 372 372 5.8E-253
IPR039331
SUPERFAMILY
SSF49363
1 78 78 1.7E-21
IPR008963
Gene3D
G3DSA:2.60.40.380
1 79 79 4.5E-23
IPR008963
Gene3D
G3DSA:3.60.21.10
80 362 283 3.9E-108
IPR029052
CDD
cd00839
80 358 279 1.68407E-113
IPR041792
SUPERFAMILY
SSF56300
82 346 265 2.67E-58 –
Pfam
PF00149
84 274 191 1.0E-23
IPR004843
Pfam
PF14008
289 347 59 4.9E-21
IPR025733

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003993
Molecular function Acid phosphatase activity Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum.
Subterm of
GO:0016787
Molecular function Hydrolase activity Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
Subterm of
GO:0046872
Molecular function Metal ion binding Interacting selectively and non-covalently with any metal ion.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0032700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…